Conservation of cofitness between TX73_016655 and TX73_023085 in Rhodopseudomonas palustris CGA009

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_016655 replication-associated recombination protein A 1.0 TX73_023085 RNA polymerase sigma factor 0.44 7
Azospirillum sp. SherDot2 0.66 MPMX19_01528 Replication-associated recombination protein A 0.35 MPMX19_05475 hypothetical protein — —
Caulobacter crescentus NA1000 Δfur 0.59 CCNA_01342 ATPase, AAA family 0.34 CCNA_02837 RNA polymerase ECF-type sigma factor low > 67
Caulobacter crescentus NA1000 0.59 CCNA_01342 ATPase, AAA family 0.34 CCNA_02837 RNA polymerase ECF-type sigma factor low > 66
Magnetospirillum magneticum AMB-1 0.57 AMB_RS17620 replication-associated recombination protein A 0.34 AMB_RS14160 RNA polymerase sigma factor low > 64
Pseudomonas sp. RS175 0.47 PFR28_02606 Replication-associated recombination protein A 0.18 PFR28_00690 RNA polymerase sigma-H factor low > 88
Pseudomonas sp. S08-1 0.47 OH686_00270 Replication-associated recombination protein RarA 0.18 OH686_20045 RNA polymerase sigma factor RpoE low > 80
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_27640 recombination factor protein RarA 0.18 AO353_17625 RNA polymerase subunit sigma low > 101
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_22185 recombination factor protein RarA 0.18 AO356_04575 RNA polymerase subunit sigma low > 104
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_4062 FIG065221: Holliday junction DNA helicase 0.18 Pf1N1B4_3323 RNA polymerase sigma-H factor AlgT — —
Pseudomonas putida KT2440 0.46 PP_4002 DNA-dependent ATPase required for recombination 0.17 PP_1427 RNA polymerase sigma E factor low > 96
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_2653 FIG065221: Holliday junction DNA helicase 0.18 PfGW456L13_4516 RNA polymerase sigma-H factor AlgT 0.28 8
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_07580 rarA recombination factor protein RarA 0.19 OKGIIK_07900 rpoE RNA polymerase sigma factor RpoE low > 52
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS17320 replication-associated recombination protein A 0.19 LRK54_RS16940 RNA polymerase sigma factor RpoE low > 59
Rhodanobacter denitrificans MT42 0.44 LRK55_RS17545 replication-associated recombination protein A 0.19 LRK55_RS16655 RNA polymerase sigma factor RpoE — —
Shewanella sp. ANA-3 0.44 Shewana3_2052 recombination factor protein RarA (RefSeq) 0.18 Shewana3_3032 RNA polymerase sigma factor RpoE (RefSeq) — —
Shewanella loihica PV-4 0.44 Shew_2022 recombination factor protein RarA (RefSeq) 0.18 Shew_1048 RNA polymerase sigma factor RpoE (RefSeq) low > 60
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS01825 replication-associated recombination protein A 0.20 ABZR86_RS07180 RNA polymerase sigma factor RpoE low > 74
Dechlorosoma suillum PS 0.43 Dsui_1694 AAA ATPase 0.20 Dsui_2453 RNA polymerase sigma factor RpoE — —
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS16030 replication-associated recombination protein A 0.21 ABZR87_RS10165 RNA polymerase sigma factor RpoE low > 80
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS09515 ATPase AAA 0.21 HSERO_RS09625 RNA polymerase sigma factor RpoE — —
Variovorax sp. OAS795 0.43 ABID97_RS07835 replication-associated recombination protein A 0.19 ABID97_RS24815 sigma-70 family RNA polymerase sigma factor low > 91
Alteromonas macleodii MIT1002 0.40 MIT1002_02178 Replication-associated recombination protein A 0.18 MIT1002_02719 Sigma-24 — —
Lysobacter sp. OAE881 0.40 ABIE51_RS11445 replication-associated recombination protein A 0.17 ABIE51_RS16295 sigma-70 family RNA polymerase sigma factor low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.38 ABZR88_RS20285 replication-associated recombination protein A 0.18 ABZR88_RS19220 sigma-70 family RNA polymerase sigma factor low > 71

Not shown: 75 genomes with orthologs for TX73_016655 only; 0 genomes with orthologs for TX73_023085 only