Conservation of cofitness between TX73_001525 and TX73_000215 in Rhodopseudomonas palustris CGA009

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_001525 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 1.0 TX73_000215 tRNA epoxyqueuosine(34) reductase QueG 0.49 13
Bosea sp. OAE506 0.42 ABIE41_RS04690 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.53 ABIE41_RS03135 tRNA epoxyqueuosine(34) reductase QueG — —
Agrobacterium fabrum C58 0.32 Atu2830 glucose inhibited division protein 0.52 Atu0292 iron-sulfur cluster binding protein — —
Sinorhizobium meliloti 1021 0.32 SMc02799 16S rRNA methyltransferase GidB 0.58 SMc00406 4Fe-4S ferredoxin low > 103
Rhizobium sp. OAE497 0.32 ABIE40_RS19210 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.58 ABIE40_RS01310 tRNA epoxyqueuosine(34) reductase QueG low > 107
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS13710 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.53 A4249_RS11375 tRNA epoxyqueuosine(34) reductase QueG low > 48
Magnetospirillum magneticum AMB-1 0.30 AMB_RS00015 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.46 AMB_RS03995 tRNA epoxyqueuosine(34) reductase QueG low > 64
Caulobacter crescentus NA1000 0.29 CCNA_03870 methyltransferase GidB 0.55 CCNA_03753 iron-sulfur cluster-binding protein low > 66
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_03870 methyltransferase GidB 0.55 CCNA_03753 iron-sulfur cluster-binding protein low > 67
Dinoroseobacter shibae DFL-12 0.29 Dshi_3456 methyltransferase GidB (RefSeq) 0.52 Dshi_3307 domain of unknown function DUF1730 (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.29 PGA1_c35090 ribosomal RNA small subunit methyltransferase G 0.54 PGA1_c34310 Uncharacterized Fe-S protein low > 62
Rhodospirillum rubrum S1H 0.27 Rru_A3626 Glucose inhibited division protein (NCBI) 0.53 Rru_A0279 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) low > 58
Sphingomonas koreensis DSMZ 15582 0.20 Ga0059261_2206 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.47 Ga0059261_1058 epoxyqueuosine reductase low > 68
Ralstonia solanacearum PSI07 0.18 RPSI07_RS08415 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.30 RPSI07_RS12175 tRNA epoxyqueuosine(34) reductase QueG low > 81
Ralstonia solanacearum GMI1000 0.17 RS_RS16670 ribosomal RNA small subunit methyltransferase G 0.30 RS_RS12740 tRNA epoxyqueuosine(34) reductase QueG — —
Ralstonia solanacearum IBSBF1503 0.16 RALBFv3_RS08860 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.31 RALBFv3_RS05120 tRNA epoxyqueuosine(34) reductase QueG — —
Ralstonia solanacearum UW163 0.16 UW163_RS04750 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.31 UW163_RS08505 tRNA epoxyqueuosine(34) reductase QueG — —
Escherichia coli ECOR38 0.15 HEPCGN_13505 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.30 HEPCGN_10515 queG tRNA epoxyqueuosine(34) reductase QueG low > 87
Pseudomonas sp. S08-1 0.15 OH686_12665 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.32 OH686_09500 epoxyqueuosine reductase low > 80
Xanthomonas campestris pv. campestris strain 8004 0.15 Xcc-8004.5135.1 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.32 Xcc-8004.2252.1 Epoxyqueuosine (oQ) reductase QueG low > 74
Pseudomonas sp. RS175 0.15 PFR28_04586 Ribosomal RNA small subunit methyltransferase G 0.31 PFR28_05115 Epoxyqueuosine reductase low > 88
Escherichia fergusonii Becca 0.14 EFB2_04893 Ribosomal RNA small subunit methyltransferase G 0.30 EFB2_04369 Epoxyqueuosine reductase low > 86
Escherichia coli BL21 0.14 ECD_03624 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein 0.31 ECD_04033 epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis low > 61
Escherichia coli Nissle 1917 0.14 ECOLIN_RS21510 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.30 ECOLIN_RS24200 tRNA epoxyqueuosine(34) reductase QueG low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.14 OHPLBJKB_04313 Ribosomal RNA small subunit methyltransferase G 0.31 OHPLBJKB_03876 Epoxyqueuosine reductase low > 73
Escherichia coli BW25113 0.14 b3740 gidB glucose-inhibited division protein B (NCBI) 0.31 b4166 yjeS predicted Fe-S electron transport protein (NCBI) low > 76
Escherichia coli ECRC62 0.14 BNILDI_04600 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.31 BNILDI_06940 queG tRNA epoxyqueuosine(34) reductase QueG low > 75
Escherichia coli ECRC100 0.14 OKFHMN_14790 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.30 OKFHMN_12285 queG tRNA epoxyqueuosine(34) reductase QueG low > 80
Escherichia coli ECOR27 0.14 NOLOHH_06925 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.31 NOLOHH_04550 queG tRNA epoxyqueuosine(34) reductase QueG low > 75
Escherichia coli ECRC99 0.14 KEDOAH_13360 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.30 KEDOAH_15870 queG tRNA epoxyqueuosine(34) reductase QueG — —
Escherichia coli ECRC101 0.14 MCAODC_05295 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.30 MCAODC_02800 queG tRNA epoxyqueuosine(34) reductase QueG low > 87
Escherichia coli ECRC102 0.14 NIAGMN_12545 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.30 NIAGMN_10135 queG tRNA epoxyqueuosine(34) reductase QueG — —
Escherichia coli ECRC98 0.14 JDDGAC_18410 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.30 JDDGAC_15925 queG tRNA epoxyqueuosine(34) reductase QueG low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.14 Psyr_5131 16S rRNA m(7)G-527 methyltransferase 0.32 Psyr_0566 4Fe-4S cluster binding protein low > 86
Pseudomonas syringae pv. syringae B728a 0.14 Psyr_5131 16S rRNA m(7)G-527 methyltransferase 0.32 Psyr_0566 4Fe-4S cluster binding protein low > 86
Pseudomonas fluorescens GW456-L13 0.13 PfGW456L13_672 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.31 PfGW456L13_160 Epoxyqueuosine (oQ) reductase QueG low > 87
Marinobacter adhaerens HP15 0.13 HP15_3689 glucose-inhibited division protein B 0.30 HP15_2505 iron-sulfur cluster binding protein low > 73
Enterobacter asburiae PDN3 0.13 EX28DRAFT_4016 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.31 EX28DRAFT_3363 epoxyqueuosine reductase low > 76
Pseudomonas stutzeri RCH2 0.13 Psest_4364 16S rRNA (guanine(527)-N(7))-methyltransferase GidB 0.31 Psest_0677 iron-sulfur cluster binding protein, putative low > 67

Not shown: 4 genomes with orthologs for TX73_001525 only; 36 genomes with orthologs for TX73_000215 only