Conservation of cofitness between SMc02553 and SMc04235 in Sinorhizobium meliloti 1021

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc02553 hypothetical protein 1.0 SMc04235 tRNA-dihydrouridine synthase A 0.40 2
Rhizobium sp. OAE497 0.67 ABIE40_RS06175 SOS response-associated peptidase 0.58 ABIE40_RS10895 tRNA dihydrouridine(20/20a) synthase DusA low > 107
Agrobacterium fabrum C58 0.64 Atu1059 hypothetical protein 0.56 Atu1515 hypothetical protein low > 89
Bosea sp. OAE506 0.39 ABIE41_RS22245 SOS response-associated peptidase 0.44 ABIE41_RS21285 tRNA dihydrouridine(20/20a) synthase DusA low > 77
Rhodopseudomonas palustris CGA009 0.33 TX73_005525 SOS response-associated peptidase 0.40 TX73_010150 tRNA dihydrouridine(20/20a) synthase DusA low > 86
Rhodospirillum rubrum S1H 0.26 Rru_A3713 Protein of unknown function DUF159 (NCBI) 0.41 Rru_A1621 Dihydrouridine synthase TIM-barrel protein yjbN (NCBI) low > 58
Azospirillum brasilense Sp245 0.25 AZOBR_RS06735 hypothetical protein 0.44 AZOBR_RS15935 tRNA-dihydrouridine synthase A — —
Dinoroseobacter shibae DFL-12 0.24 Dshi_0851 protein of unknown function DUF159 (RefSeq) 0.43 Dshi_2512 TIM-barrel protein, yjbN family (RefSeq) low > 64
Azospirillum sp. SherDot2 0.23 MPMX19_01088 hypothetical protein 0.44 MPMX19_00670 tRNA-dihydrouridine(20/20a) synthase low > 112
Marinobacter adhaerens HP15 0.20 HP15_875 protein containing DUF159 0.38 HP15_2240 tRNA-dihydrouridine synthase, TIM-barrel, YjbN low > 73
Rhodanobacter denitrificans MT42 0.19 LRK55_RS18630 SOS response-associated peptidase 0.43 LRK55_RS05750 tRNA dihydrouridine(20/20a) synthase DusA low > 63
Escherichia coli Nissle 1917 0.17 ECOLIN_RS11020 SOS response-associated peptidase 0.40 ECOLIN_RS23355 tRNA dihydrouridine(20/20a) synthase DusA — —
Pseudomonas syringae pv. syringae B728a 0.17 Psyr_0983 Protein of unknown function DUF159 0.41 Psyr_1936 tRNA-U16,U17-dihydrouridine synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.17 Psyr_0983 Protein of unknown function DUF159 0.41 Psyr_1936 tRNA-U16,U17-dihydrouridine synthase low > 86
Escherichia coli ECRC62 0.17 BNILDI_15145 yedK Abasic site processing protein YedK 0.40 BNILDI_06330 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 75
Escherichia coli BW25113 0.17 b1931 yedK hypothetical protein (NCBI) 0.40 b4049 dusA tRNA-dihydrouridine synthase A (RefSeq) low > 76
Escherichia coli ECRC99 0.17 KEDOAH_02355 yedK Abasic site processing protein YedK 0.40 KEDOAH_15205 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli ECRC100 0.17 OKFHMN_25735 yedK Abasic site processing protein YedK 0.40 OKFHMN_12945 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli ECRC102 0.17 NIAGMN_02315 yedK Abasic site processing protein YedK 0.40 NIAGMN_10790 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli ECRC98 0.17 JDDGAC_00325 yedK Abasic site processing protein YedK 0.40 JDDGAC_16580 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 86
Escherichia coli ECRC101 0.17 MCAODC_19655 yedK Abasic site processing protein YedK 0.41 MCAODC_03455 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 87
Escherichia coli ECOR27 0.17 NOLOHH_16355 yedK Abasic site processing protein YedK 0.40 NOLOHH_05195 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 75
Escherichia fergusonii Becca 0.17 EFB2_02014 SOS response-associated protein YedK 0.40 EFB2_04556 tRNA-dihydrouridine(20/20a) synthase low > 86
Enterobacter asburiae PDN3 0.16 EX28DRAFT_1552 Uncharacterized conserved protein 0.41 EX28DRAFT_4263 tRNA dihydrouridine synthase A low > 76
Enterobacter sp. TBS_079 0.16 MPMX20_04740 SOS response-associated protein YedK 0.42 MPMX20_00265 tRNA-dihydrouridine(20/20a) synthase low > 85
Escherichia coli ECOR38 0.16 HEPCGN_04090 yedK Abasic site processing protein YedK 0.40 HEPCGN_11560 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 87
Pseudomonas sp. RS175 0.16 PFR28_03627 SOS response-associated protein YedK 0.39 PFR28_01143 tRNA-dihydrouridine(20/20a) synthase low > 88
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_1612 FIG00956396: hypothetical protein 0.36 PfGW456L13_3987 tRNA dihydrouridine synthase A low > 87
Pseudomonas fluorescens FW300-N2C3 0.16 AO356_16640 hypothetical protein 0.39 AO356_02170 tRNA-dihydrouridine synthase A — —
Pseudomonas fluorescens SBW25-INTG 0.16 PFLU_RS04550 SOS response-associated peptidase 0.38 PFLU_RS07810 tRNA dihydrouridine(20/20a) synthase DusA — —
Pseudomonas fluorescens SBW25 0.16 PFLU_RS04550 SOS response-associated peptidase 0.38 PFLU_RS07810 tRNA dihydrouridine(20/20a) synthase DusA — —
Pseudomonas fluorescens FW300-N1B4 0.15 Pf1N1B4_2949 FIG00956396: hypothetical protein 0.39 Pf1N1B4_57 tRNA dihydrouridine synthase A low > 87
Pseudomonas simiae WCS417 0.15 PS417_04505 hypothetical protein 0.38 PS417_07740 tRNA-dihydrouridine synthase A — —
Pseudomonas stutzeri RCH2 0.14 Psest_3230 Uncharacterized conserved protein 0.39 Psest_2706 tRNA dihydrouridine synthase A low > 67

Not shown: 2 genomes with orthologs for SMc02553 only; 50 genomes with orthologs for SMc04235 only