Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS20855 | | cold-shock protein | 1.0 | RR42_RS28800 | | isocitrate dehydrogenase | 0.43 | 19 |
Burkholderia phytofirmans PsJN | 0.84 | BPHYT_RS34185 | | cold-shock protein | 0.62 | BPHYT_RS20300 | | isocitrate dehydrogenase | — | — |
Rhodanobacter denitrificans FW104-10B01 | 0.75 | LRK54_RS17025 | | cold-shock protein | 0.63 | LRK54_RS09910 | | NADP-dependent isocitrate dehydrogenase | low | > 59 |
Rhodanobacter denitrificans MT42 | 0.75 | LRK55_RS16740 | | cold-shock protein | 0.62 | LRK55_RS09550 | | NADP-dependent isocitrate dehydrogenase | — | — |
Shewanella amazonensis SB2B | 0.74 | Sama_2058 | | cold-shock DNA-binding domain-containing protein (RefSeq) | 0.63 | Sama_2059 | | isocitrate dehydrogenase (NADP(+)) (RefSeq) | low | > 62 |
Shewanella sp. ANA-3 | 0.73 | Shewana3_1751 | | cold-shock DNA-binding protein family protein (RefSeq) | 0.64 | Shewana3_1750 | | isocitrate dehydrogenase, NADP-dependent (RefSeq) | low | > 73 |
Shewanella oneidensis MR-1 | 0.73 | SO2628 | cspD | stress response protein CspD (NCBI ptt file) | 0.63 | SO2629 | icd | isocitrate dehydrogenase, NADP-dependent (NCBI ptt file) | low | > 76 |
Rhodanobacter sp. FW510-T8 | 0.72 | OKGIIK_07815 | cspC | cold-shock protein | 0.61 | OKGIIK_16160 | icdM | NADP-dependent isocitrate dehydrogenase | — | — |
Shewanella loihica PV-4 | 0.72 | Shew_1564 | | cold-shock DNA-binding domain-containing protein (RefSeq) | 0.63 | Shew_1563 | | isocitrate dehydrogenase, NADP-dependent (RefSeq) | low | > 60 |
Pseudomonas simiae WCS417 | 0.70 | PS417_19715 | | cold-shock protein | 0.63 | PS417_16530 | | isocitrate dehydrogenase | — | — |
Alteromonas macleodii MIT1002 | 0.70 | MIT1002_01832 | | Cold shock-like protein CspD | 0.69 | MIT1002_01830 | | Isocitrate dehydrogenase [NADP] 2 | low | > 70 |
Vibrio cholerae E7946 ATCC 55056 | 0.68 | CSW01_18795 | | cold-shock protein CspV | 0.64 | CSW01_05790 | | isocitrate dehydrogenase (NADP(+)) | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.66 | PFLU_RS21685 | | cold-shock protein | 0.63 | PFLU_RS18570 | | NADP-dependent isocitrate dehydrogenase | — | — |
Pseudomonas fluorescens SBW25 | 0.66 | PFLU_RS21685 | | cold-shock protein | 0.63 | PFLU_RS18570 | | NADP-dependent isocitrate dehydrogenase | — | — |
Kangiella aquimarina DSM 16071 | 0.63 | B158DRAFT_1826 | | Cold shock proteins | 0.65 | B158DRAFT_1836 | | isocitrate dehydrogenase, NADP-dependent, monomeric type | — | — |
Marinobacter adhaerens HP15 | 0.62 | HP15_2054 | | cold shock, CspA | 0.68 | HP15_3800 | | isocitrate dehydrogenase, NADP-dependent | — | — |
Magnetospirillum magneticum AMB-1 | 0.58 | AMB_RS08040 | | cold-shock protein | 0.64 | AMB_RS03135 | | NADP-dependent isocitrate dehydrogenase | low | > 64 |
Dinoroseobacter shibae DFL-12 | 0.57 | Dshi_2219 | | cold-shock DNA-binding domain protein (RefSeq) | 0.47 | Dshi_1986 | | isocitrate dehydrogenase, NADP-dependent (RefSeq) | — | — |
Phaeobacter inhibens DSM 17395 | 0.57 | PGA1_c26360 | | cold shock protein | 0.51 | PGA1_c28340 | | isocitrate dehydrogenase [NADP] | — | — |
Pedobacter sp. GW460-11-11-14-LB5 | 0.51 | CA265_RS06265 | | cold-shock protein | 0.57 | CA265_RS02350 | | isocitrate dehydrogenase (NADP(+)) | — | — |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.43 | Echvi_3729 | | Cold shock proteins | 0.61 | Echvi_1839 | | isocitrate dehydrogenase, NADP-dependent, monomeric type | — | — |
Not shown: 40 genomes with orthologs for RR42_RS20855 only; 24 genomes with orthologs for RR42_RS28800 only