Conservation of cofitness between RR42_RS20450 and RR42_RS18950 in Cupriavidus basilensis FW507-4G11

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS20450 16S rRNA methyltransferase 1.0 RR42_RS18950 hypothetical protein 0.42 17
Ralstonia solanacearum PSI07 0.55 RPSI07_RS23575 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.50 RPSI07_RS10355 hypothetical protein low > 81
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS04950 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.50 ABZR87_RS02535 phospholipid-binding protein MlaC low > 80
Ralstonia solanacearum GMI1000 0.52 RS_RS00375 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.52 RS_RS14825 hypothetical protein low > 80
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS09790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.50 RALBFv3_RS06880 hypothetical protein low > 76
Ralstonia solanacearum UW163 0.51 UW163_RS03790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.50 UW163_RS06735 hypothetical protein — —
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS00355 methyltransferase 0.54 HSERO_RS20380 hypothetical protein — —
Acidovorax sp. GW101-3H11 0.37 Ac3H11_4461 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.49 Ac3H11_4716 Toluene tolerance precursor low > 79
Dechlorosoma suillum PS 0.37 Dsui_0812 ribosomal RNA small subunit methyltransferase RsmB 0.41 Dsui_1402 ABC-type transport system involved in resistance to organic solvents, auxiliary component low > 51
Variovorax sp. SCN45 0.36 GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) 0.50 GFF5338 Phospholipid ABC transporter shuttle protein MlaC low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF1789 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.53 GFF1321 Uncharacterized ABC transporter, auxiliary component YrbC 0.45 34
Variovorax sp. OAS795 0.35 ABID97_RS05360 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.48 ABID97_RS23195 ABC transporter substrate-binding protein low > 91
Enterobacter sp. TBS_079 0.31 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B 0.20 MPMX20_04098 Intermembrane phospholipid transport system binding protein MlaC low > 85
Escherichia fergusonii Becca 0.31 EFB2_00535 Ribosomal RNA small subunit methyltransferase B 0.18 EFB2_00631 Intermembrane phospholipid transport system binding protein MlaC low > 86
Escherichia coli Nissle 1917 0.31 ECOLIN_RS18875 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.18 ECOLIN_RS18375 phospholipid-binding protein MlaC low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 0.18 GFF2936 Uncharacterized ABC transporter, auxiliary component YrbC low > 78
Escherichia coli BL21 0.31 ECD_03139 16S rRNA m(5)C967 methyltransferase, SAM-dependent 0.18 ECD_03057 ABC transporter maintaining OM lipid asymmetry, periplasmic binding protein low > 61
Escherichia coli BW25113 0.31 b3289 rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) 0.18 b3192 yrbC predicted ABC-type organic solvent transporter (NCBI) low > 76
Escherichia coli ECRC62 0.31 BNILDI_02200 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.18 BNILDI_01745 mlaC phospholipid-binding protein MlaC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_00415 Ribosomal RNA small subunit methyltransferase B 0.18 OHPLBJKB_00508 putative phospholipid-binding protein MlaC low > 73
Escherichia coli ECOR27 0.31 NOLOHH_09320 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.18 NOLOHH_09790 mlaC phospholipid-binding protein MlaC low > 75
Escherichia coli ECOR38 0.31 HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.18 HEPCGN_16865 mlaC phospholipid-binding protein MlaC low > 87
Escherichia coli ECRC101 0.31 MCAODC_08050 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.18 MCAODC_08510 mlaC phospholipid-binding protein MlaC low > 87
Escherichia coli ECRC100 0.31 OKFHMN_17520 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.18 OKFHMN_17990 mlaC phospholipid-binding protein MlaC low > 80
Enterobacter asburiae PDN3 0.31 EX28DRAFT_0039 16S rRNA (cytosine(967)-C(5))-methyltransferase 0.20 EX28DRAFT_3246 ABC-type transport system involved in resistance to organic solvents, auxiliary component low > 76
Escherichia coli ECRC102 0.31 NIAGMN_15290 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.18 NIAGMN_15750 mlaC phospholipid-binding protein MlaC — —
Escherichia coli ECRC98 0.31 JDDGAC_21150 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.18 JDDGAC_21615 mlaC phospholipid-binding protein MlaC low > 86
Escherichia coli ECRC99 0.31 KEDOAH_10620 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.18 KEDOAH_10160 mlaC phospholipid-binding protein MlaC — —
Klebsiella michiganensis M5al 0.31 BWI76_RS25680 16S rRNA m5C967 methyltransferase 0.17 BWI76_RS25215 phospholipid-binding protein MlaC low > 92
Serratia liquefaciens MT49 0.30 IAI46_23275 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.19 IAI46_22415 phospholipid-binding protein MlaC low > 86
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_00225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.16 CSW01_12760 phospholipid-binding protein MlaC low > 62
Alteromonas macleodii MIT1002 0.27 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B 0.18 MIT1002_00837 putative phospholipid-binding protein MlaC precursor low > 70
Shewanella loihica PV-4 0.27 Shew_3738 sun protein (RefSeq) 0.21 Shew_3301 toluene tolerance family protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.27 Shewana3_0033 sun protein (RefSeq) 0.21 Shewana3_0681 toluene tolerance family protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.26 SO0030 sun sun protein (NCBI ptt file) 0.20 SO3951 conserved hypothetical protein (NCBI ptt file) low > 76

Not shown: 35 genomes with orthologs for RR42_RS20450 only; 1 genomes with orthologs for RR42_RS18950 only