Conservation of cofitness between RR42_RS29085 and RR42_RS15135 in Cupriavidus basilensis FW507-4G11

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS29085 glucarate transporter 1.0 RR42_RS15135 LysR family transcriptional regulator 0.37 4
Paraburkholderia sabiae LMG 24235 0.75 QEN71_RS33565 MFS transporter 0.48 QEN71_RS04990 LysR family transcriptional regulator low > 153
Paraburkholderia bryophila 376MFSha3.1 0.75 H281DRAFT_05318 MFS transporter, ACS family, glucarate transporter 0.49 H281DRAFT_04446 transcriptional regulator, LysR family low > 103
Burkholderia phytofirmans PsJN 0.75 BPHYT_RS24150 glucarate transporter 0.48 BPHYT_RS13975 LysR family transcriptional regulator low > 109
Paraburkholderia graminis OAS925 0.75 ABIE53_006507 ACS family glucarate transporter-like MFS transporter 0.49 ABIE53_002962 DNA-binding transcriptional LysR family regulator low > 113
Herbaspirillum seropedicae SmR1 0.70 HSERO_RS15805 glucarate transporter 0.49 HSERO_RS19620 LysR family transcriptional regulator low > 78
Pseudomonas sp. RS175 0.69 PFR28_00144 putative glucarate transporter 0.37 PFR28_00773 HTH-type transcriptional regulator GltR low > 88
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_07175 glucarate transporter 0.39 AO356_04115 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_3297 D-galactarate permease 0.39 Pf6N2E2_2660 Transcriptional regulators, LysR family low > 103
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_5043 D-galactarate permease 0.41 PfGW456L13_3879 LysR family transcriptional regulator YneJ low > 87
Pectobacterium carotovorum WPP14 0.68 HER17_RS04075 MFS transporter 0.35 HER17_RS12785 LysR family transcriptional regulator low > 75
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_4226 D-galactonate transporter 0.39 Psyr_2395 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_4226 D-galactonate transporter 0.39 Psyr_2395 transcriptional regulator, LysR family low > 86
Rahnella sp. WP5 0.68 EX31_RS03160 MFS transporter 0.39 EX31_RS00185 LysR family transcriptional regulator low > 89
Escherichia fergusonii Becca 0.68 EFB2_01128 putative glucarate transporter 0.38 EFB2_02434 HTH-type transcriptional regulator GltR low > 86
Escherichia coli BW25113 0.68 b2789 gudP predicted D-glucarate transporter (NCBI) 0.38 b1526 yneJ predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli Nissle 1917 0.68 ECOLIN_RS15540 galactarate/glucarate/glycerate transporter GudP 0.38 ECOLIN_RS08715 LysR family transcriptional regulator — —
Escherichia coli BL21 0.68 ECD_02634 putative D-glucarate transporter 0.38 ECD_01483 putative DNA-binding transcriptional regulator — —
Escherichia coli ECRC62 0.68 BNILDI_10605 gudP galactarate/glucarate/glycerate transporter GudP 0.38 BNILDI_17235 yneJ Uncharacterized HTH-type transcriptional regulator YneJ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_00942 putative glucarate transporter 0.38 OHPLBJKB_02193 HTH-type transcriptional regulator GltR low > 73
Escherichia coli ECOR27 0.68 NOLOHH_12100 gudP galactarate/glucarate/glycerate transporter GudP 0.38 NOLOHH_18755 yneJ Uncharacterized HTH-type transcriptional regulator YneJ low > 75
Escherichia coli ECRC101 0.67 MCAODC_10745 gudP galactarate/glucarate/glycerate transporter GudP 0.37 MCAODC_16820 yneJ Uncharacterized HTH-type transcriptional regulator YneJ low > 87
Escherichia coli ECRC99 0.67 KEDOAH_07910 gudP galactarate/glucarate/glycerate transporter GudP 0.37 KEDOAH_27325 yneJ Uncharacterized HTH-type transcriptional regulator YneJ — —
Escherichia coli ECRC98 0.67 JDDGAC_23885 gudP galactarate/glucarate/glycerate transporter GudP 0.37 JDDGAC_03615 yneJ Uncharacterized HTH-type transcriptional regulator YneJ — —
Escherichia coli ECRC102 0.67 NIAGMN_17990 gudP galactarate/glucarate/glycerate transporter GudP 0.37 NIAGMN_25250 yneJ Uncharacterized HTH-type transcriptional regulator YneJ — —
Escherichia coli ECRC100 0.67 OKFHMN_20220 gudP galactarate/glucarate/glycerate transporter GudP 0.37 OKFHMN_01105 yneJ Uncharacterized HTH-type transcriptional regulator YneJ — —
Dickeya dadantii 3937 0.66 DDA3937_RS17055 MFS transporter 0.31 DDA3937_RS09330 LysR family transcriptional regulator low > 74
Dickeya dianthicola ME23 0.66 DZA65_RS18185 MFS transporter 0.31 DZA65_RS09660 LysR family transcriptional regulator low > 75
Dickeya dianthicola 67-19 0.66 HGI48_RS17110 MFS transporter 0.31 HGI48_RS09355 LysR family transcriptional regulator low > 71
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2870 D-galactonate transporter 0.36 EX28DRAFT_1199 Transcriptional regulator low > 76
Pantoea sp. MT58 0.64 IAI47_04080 MFS transporter 0.39 IAI47_06710 LysR family transcriptional regulator low > 76
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS20330 MFS transporter 0.60 ABZR87_RS09325 LysR family transcriptional regulator low > 80
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS19740 MFS transporter 0.61 RALBFv3_RS13245 LysR family transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.64 UW163_RS19435 MFS transporter 0.61 UW163_RS00325 LysR family transcriptional regulator — —
Ralstonia solanacearum GMI1000 0.63 RS_RS21080 MFS transporter 0.60 RS_RS04040 LysR family transcriptional regulator low > 80
Ralstonia solanacearum PSI07 0.63 RPSI07_RS03475 MFS transporter 0.60 RPSI07_RS19975 LysR family transcriptional regulator low > 81
Serratia liquefaciens MT49 0.36 IAI46_16925 MFS transporter 0.37 IAI46_07890 LysR family transcriptional regulator low > 86

Not shown: 14 genomes with orthologs for RR42_RS29085 only; 3 genomes with orthologs for RR42_RS15135 only