Conservation of cofitness between RR42_RS01040 and RR42_RS11260 in Cupriavidus basilensis FW507-4G11

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS01040 cobalamin biosynthesis protein CobW 1.0 RR42_RS11260 Methylisocitrate lyase (EC 4.1.3.30) (from data) 0.30 15
Ralstonia solanacearum GMI1000 0.77 RS_RS00235 GTP-binding protein 0.86 RS_RS10050 methylisocitrate lyase low > 80
Ralstonia solanacearum PSI07 0.77 RPSI07_RS23715 GTP-binding protein 0.87 RPSI07_RS14645 methylisocitrate lyase low > 81
Ralstonia solanacearum UW163 0.76 UW163_RS03930 GTP-binding protein 0.87 UW163_RS11055 methylisocitrate lyase — —
Ralstonia solanacearum IBSBF1503 0.76 RALBFv3_RS09650 GTP-binding protein 0.87 RALBFv3_RS02670 methylisocitrate lyase low > 76
Ralstonia sp. UNC404CL21Col 0.75 ABZR87_RS05095 GTP-binding protein 0.88 ABZR87_RS14590 methylisocitrate lyase low > 80
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS00345 GTP-binding protein 0.80 QEN71_RS17555 methylisocitrate lyase low > 153
Castellaniella sp019104865 MT123 0.54 ABCV34_RS13425 GTP-binding protein 0.77 ABCV34_RS01670 methylisocitrate lyase low > 48
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2773 COG0523: Putative GTPases (G3E family) 0.80 Pf1N1B4_3819 Methylisocitrate lyase (EC 4.1.3.30) low > 87
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_1446 COG0523: Putative GTPases (G3E family) 0.80 PfGW456L13_4118 Methylisocitrate lyase (EC 4.1.3.30) low > 87
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS26200 GTPase 0.80 PFLU_RS22690 methylisocitrate lyase low > 109
Pseudomonas fluorescens SBW25 0.38 PFLU_RS26200 GTPase 0.80 PFLU_RS22690 methylisocitrate lyase low > 109
Pseudomonas simiae WCS417 0.38 PS417_24285 GTP-binding protein 0.80 PS417_21080 2-methylisocitrate lyase — —
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_4271 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K 0.78 Psyr_2085 methylisocitrate lyase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_4271 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K 0.78 Psyr_2085 methylisocitrate lyase low > 86
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_14000 GTP-binding protein 0.81 AO353_00900 2-methylisocitrate lyase low > 101
Pseudomonas sp. RS175 0.37 PFR28_03788 P-loop guanosine triphosphatase YjiA 0.81 PFR28_02928 2-methylisocitrate lyase low > 88
Pseudomonas putida KT2440 0.37 PP_4639 P-loop guanosine triphosphatase-dependent zinc chaperone 0.81 PP_2334 2-methylisocitrate lyase low > 96
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_5080 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.81 Pf6N2E2_6061 Methylisocitrate lyase (EC 4.1.3.30) (from data) low > 103
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_15700 GTP-binding protein 0.81 AO356_20865 2-methylisocitrate lyase low > 104
Pseudomonas sp. S08-1 0.36 OH686_16220 Metal-binding GTPase YjiA 0.73 OH686_01690 methylisocitrate lyase low > 80
Rhodopseudomonas palustris CGA009 0.35 TX73_004440 GTP-binding protein 0.36 TX73_012370 methylisocitrate lyase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF1006 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.74 GFF4263 Methylisocitrate lyase (EC 4.1.3.30) low > 78
Escherichia fergusonii Becca 0.34 EFB2_04096 P-loop guanosine triphosphatase YjiA 0.75 EFB2_03706 2-methylisocitrate lyase low > 86
Escherichia coli ECOR27 0.34 NOLOHH_03775 yjiA GTPase 0.75 NOLOHH_01775 prpB methylisocitrate lyase low > 75
Escherichia coli ECRC62 0.34 BNILDI_07825 yjiA GTPase 0.75 BNILDI_23190 prpB methylisocitrate lyase low > 75
Escherichia coli ECOR38 0.34 HEPCGN_09435 yjiA GTPase 0.76 HEPCGN_07485 prpB methylisocitrate lyase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_03722 putative GTP-binding protein YjiA 0.75 OHPLBJKB_03339 2-methylisocitrate lyase low > 73
Escherichia coli Nissle 1917 0.34 ECOLIN_RS24980 GTPase 0.75 ECOLIN_RS02150 methylisocitrate lyase low > 55
Escherichia coli ECRC101 0.34 MCAODC_01910 yjiA GTPase 0.75 MCAODC_28130 prpB methylisocitrate lyase low > 87
Escherichia coli ECRC102 0.34 NIAGMN_09245 yjiA GTPase 0.75 NIAGMN_06955 prpB methylisocitrate lyase — —
Escherichia coli ECRC100 0.34 OKFHMN_11395 yjiA GTPase 0.75 OKFHMN_08900 prpB methylisocitrate lyase low > 80
Escherichia coli BL21 0.34 ECD_04218 metal-binding GTPase 0.75 ECD_00286 2-methylisocitrate lyase low > 61
Escherichia coli ECRC98 0.34 JDDGAC_14990 yjiA GTPase 0.75 JDDGAC_12555 prpB methylisocitrate lyase low > 86
Escherichia coli BW25113 0.33 b4352 yjiA orf, hypothetical protein (VIMSS) 0.75 b0331 prpB 2-methylisocitrate lyase (NCBI) low > 76
Escherichia coli ECRC99 0.33 KEDOAH_16750 yjiA GTPase 0.75 KEDOAH_19065 prpB methylisocitrate lyase — —
Shewanella oneidensis MR-1 0.12 SO1502 cobalamin synthesis protein/P47K family protein (NCBI ptt file) 0.61 SO0345 prpB methylisocitrate lyase (NCBI ptt file) low > 76

Not shown: 26 genomes with orthologs for RR42_RS01040 only; 17 genomes with orthologs for RR42_RS11260 only