Conservation of cofitness between RR42_RS02080 and RR42_RS11095 in Cupriavidus basilensis FW507-4G11

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS02080 ribosome hibernation promoting factor 1.0 RR42_RS11095 3-hydroxyacyl-CoA dehydrogenase 0.47 19
Ralstonia solanacearum GMI1000 0.87 RS_RS02015 ribosomal subunit interface protein 0.82 RS_RS08885 3-hydroxyacyl-CoA dehydrogenase low > 80
Ralstonia solanacearum IBSBF1503 0.85 RALBFv3_RS11165 ribosomal subunit interface protein 0.82 RALBFv3_RS01130 3-hydroxyacyl-CoA dehydrogenase low > 76
Ralstonia solanacearum UW163 0.85 UW163_RS02415 ribosomal subunit interface protein 0.82 UW163_RS14440 3-hydroxyacyl-CoA dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.85 ABZR87_RS07055 ribosome-associated translation inhibitor RaiA 0.86 ABZR87_RS12585 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 80
Ralstonia solanacearum PSI07 0.84 RPSI07_RS22135 ribosomal subunit interface protein 0.82 RPSI07_RS16345 3-hydroxyacyl-CoA dehydrogenase low > 81
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS01750 ribosome-associated translation inhibitor RaiA 0.76 QEN71_RS21890 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.70 H281DRAFT_01928 sigma 54 modulation protein /SSU ribosomal protein S30P 0.76 H281DRAFT_00916 short chain enoyl-CoA hydratase /3-hydroxyacyl-CoA dehydrogenase low > 103
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS02900 ribosome hibernation promoting factor 0.76 BPHYT_RS09560 3-hydroxyacyl-CoA dehydrogenase low > 109
Paraburkholderia graminis OAS925 0.69 ABIE53_000717 putative sigma-54 modulation protein 0.76 ABIE53_002151 3-hydroxyacyl-CoA dehydrogenase low > 113
Acidovorax sp. GW101-3H11 0.64 Ac3H11_681 Ribosome hibernation protein YhbH 0.68 Ac3H11_2523 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 79
Variovorax sp. OAS795 0.63 ABID97_RS04490 ribosome-associated translation inhibitor RaiA 0.71 ABID97_RS15740 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 91
Variovorax sp. SCN45 0.62 GFF7293 Ribosome hibernation promoting factor Hpf 0.71 GFF1342 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF2612 Ribosome hibernation protein YhbH 0.70 GFF4592 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 90
Castellaniella sp019104865 MT123 0.47 ABCV34_RS14345 ribosome-associated translation inhibitor RaiA 0.41 ABCV34_RS09055 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 48
Pseudomonas stutzeri RCH2 0.44 Psest_3314 ribosomal subunit interface protein 0.49 Psest_4235 3-hydroxyacyl-CoA dehydrogenase low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P 0.23 Psyr_3290 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase low > 86
Alteromonas macleodii MIT1002 0.42 MIT1002_00826 Ribosome hibernation promoting factor 0.48 MIT1002_01750 Fatty acid oxidation complex subunit alpha low > 70
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P 0.23 Psyr_3290 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase low > 86
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_2079 ribosomal subunit interface protein 0.25 B158DRAFT_0356 fatty oxidation complex, alpha subunit FadB low > 40
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_12820 ribosome hibernation promoting factor 0.22 CSW01_13970 fatty acid oxidation complex subunit alpha FadB low > 62
Escherichia coli ECRC100 0.33 OKFHMN_17935 Ribosome hibernation promoting factor 0.22 OKFHMN_14245 fadB fatty acid oxidation complex subunit alpha FadB low > 80
Escherichia coli ECRC102 0.33 NIAGMN_15695 Ribosome hibernation promoting factor 0.22 NIAGMN_12000 fadB fatty acid oxidation complex subunit alpha FadB — —
Escherichia coli ECRC99 0.33 KEDOAH_10215 Ribosome hibernation promoting factor 0.22 KEDOAH_13905 fadB fatty acid oxidation complex subunit alpha FadB — —
Escherichia coli BW25113 0.33 b3203 yhbH predicted ribosome-associated, sigma 54 modulation protein (NCBI) 0.21 b3846 fadB fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase (NCBI) low > 76
Escherichia coli ECRC98 0.33 JDDGAC_21560 Ribosome hibernation promoting factor 0.22 JDDGAC_17870 fadB fatty acid oxidation complex subunit alpha FadB low > 86
Escherichia coli ECRC101 0.33 MCAODC_08455 Ribosome hibernation promoting factor 0.22 MCAODC_04750 fadB fatty acid oxidation complex subunit alpha FadB low > 87
Escherichia coli ECOR27 0.33 NOLOHH_09735 Ribosome hibernation promoting factor 0.21 NOLOHH_06375 fadB fatty acid oxidation complex subunit alpha FadB low > 75
Dickeya dadantii 3937 0.32 DDA3937_RS01525 ribosome hibernation promoting factor 0.23 DDA3937_RS20250 fatty acid oxidation complex subunit alpha FadB low > 74
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS12870 ribosome-associated translation inhibitor RaiA 0.17 LRK54_RS16925 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 59
Rhodanobacter denitrificans MT42 0.29 LRK55_RS12570 ribosome-associated translation inhibitor RaiA 0.17 LRK55_RS16640 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 63
Acinetobacter radioresistens SK82 0.26 MPMX26_02591 Ribosome hibernation promoting factor 0.24 MPMX26_00226 Fatty acid oxidation complex subunit alpha — —

Not shown: 39 genomes with orthologs for RR42_RS02080 only; 4 genomes with orthologs for RR42_RS11095 only