Conservation of cofitness between QEN71_RS17540 and QEN71_RS02525 in Paraburkholderia sabiae LMG 24235

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS17540 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 1.0 QEN71_RS02525 efflux RND transporter permease subunit 0.51 18
Paraburkholderia bryophila 376MFSha3.1 0.92 H281DRAFT_06607 2-methylcitrate dehydratase 0.93 H281DRAFT_04170 multidrug efflux pump — —
Burkholderia phytofirmans PsJN 0.91 BPHYT_RS33975 2-methylcitrate dehydratase 0.93 BPHYT_RS16170 multidrug efflux RND transporter permease subunit — —
Paraburkholderia graminis OAS925 0.91 ABIE53_004759 2-methylcitrate dehydratase 0.92 ABIE53_003408 multidrug efflux pump low > 113
Cupriavidus basilensis FW507-4G11 0.86 RR42_RS14485 2-methylcitrate dehydratase 0.82 RR42_RS32420 multidrug efflux RND transporter permease subunit low > 128
Castellaniella sp019104865 MT123 0.85 ABCV34_RS01660 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.49 ABCV34_RS04225 efflux RND transporter permease subunit — —
Variovorax sp. OAS795 0.84 ABID97_RS19375 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.52 ABID97_RS00325 efflux RND transporter permease subunit low > 91
Ralstonia solanacearum UW163 0.84 UW163_RS11040 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.62 UW163_RS19380 multidrug efflux RND transporter permease subunit — —
Ralstonia solanacearum IBSBF1503 0.84 RALBFv3_RS02685 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.62 RALBFv3_RS19795 multidrug efflux RND transporter permease subunit low > 76
Ralstonia solanacearum PSI07 0.84 RPSI07_RS14630 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.62 RPSI07_RS03390 multidrug efflux RND transporter permease subunit low > 81
Ralstonia solanacearum GMI1000 0.83 RS_RS10060 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.62 RS_RS21030 multidrug efflux RND transporter permease subunit low > 80
Escherichia coli Nissle 1917 0.83 ECOLIN_RS02160 2-methylcitrate dehydratase 0.66 ECOLIN_RS02750 efflux RND transporter permease AcrB low > 55
Escherichia coli BW25113 0.83 b0334 prpD 2-methylcitrate dehydratase (NCBI) 0.65 b0462 acrB multidrug efflux system protein (NCBI) low > 76
Escherichia coli ECRC100 0.83 OKFHMN_08890 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.65 OKFHMN_08205 acrB efflux RND transporter permease AcrB low > 80
Escherichia coli ECRC102 0.83 NIAGMN_06945 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.65 NIAGMN_06260 acrB efflux RND transporter permease AcrB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF4265 2-methylcitrate dehydratase (EC 4.2.1.79) 0.66 GFF4379 RND efflux system, inner membrane transporter CmeB low > 78
Escherichia coli ECRC101 0.83 MCAODC_28120 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.65 MCAODC_27430 acrB efflux RND transporter permease AcrB low > 87
Escherichia coli ECRC98 0.83 JDDGAC_12545 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.60 JDDGAC_25915 acrD multidrug efflux RND transporter permease AcrD low > 86
Escherichia coli ECRC99 0.83 KEDOAH_19075 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.65 KEDOAH_19760 acrB efflux RND transporter permease AcrB — —
Escherichia coli ECRC62 0.83 BNILDI_23180 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.65 BNILDI_22555 acrB efflux RND transporter permease AcrB 0.59 72
Escherichia coli ECOR27 0.83 NOLOHH_01765 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.65 NOLOHH_01140 acrB efflux RND transporter permease AcrB low > 75
Escherichia coli BL21 0.83 ECD_00288 2-methylcitrate dehydratase 0.65 ECD_00413 multidrug efflux system protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_03337 2-methylcitrate dehydratase 0.65 OHPLBJKB_03212 Multidrug efflux pump subunit AcrB low > 73
Escherichia fergusonii Becca 0.82 EFB2_03704 2-methylcitrate dehydratase 0.65 EFB2_03596 Multidrug efflux pump subunit AcrB low > 86
Escherichia coli ECOR38 0.82 HEPCGN_07475 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.65 HEPCGN_06820 acrB efflux RND transporter permease AcrB low > 87
Kangiella aquimarina DSM 16071 0.69 B158DRAFT_1358 2-methylcitrate dehydratase (EC 4.2.1.79) 0.43 B158DRAFT_0733 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family low > 40
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_3823 2-methylcitrate dehydratase (EC 4.2.1.79) 0.62 Pf1N1B4_3246 RND efflux system, inner membrane transporter CmeB low > 87
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_4114 2-methylcitrate dehydratase (EC 4.2.1.79) 0.62 PfGW456L13_4581 RND efflux system, inner membrane transporter CmeB low > 87
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_00880 2-methylcitrate dehydratase 0.62 AO353_17295 multidrug transporter low > 101
Pseudomonas simiae WCS417 0.64 PS417_21060 2-methylcitrate dehydratase 0.62 PS417_06770 multidrug transporter low > 88
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS22670 2-methylcitrate dehydratase 0.61 PFLU_RS06805 efflux RND transporter permease subunit low > 109
Pseudomonas fluorescens SBW25 0.64 PFLU_RS22670 2-methylcitrate dehydratase 0.61 PFLU_RS06805 efflux RND transporter permease subunit low > 109
Pseudomonas putida KT2440 0.63 PP_2338 2-methylcitrate dehydratase 0.61 PP_1385 Probable efflux pump membrane transporter TtgB low > 96
Rhodanobacter denitrificans FW104-10B01 0.62 LRK54_RS00675 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.46 LRK54_RS02100 multidrug efflux RND transporter permease subunit low > 59
Rhodanobacter sp. FW510-T8 0.61 OKGIIK_06580 prpD bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.47 OKGIIK_09170 Efflux pump membrane transporter low > 52
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS08425 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.60 ABZR86_RS18285 efflux RND transporter permease subunit low > 74
Rahnella sp. WP5 0.47 EX31_RS11170 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.66 EX31_RS22470 multidrug efflux RND transporter permease subunit low > 89

Not shown: 3 genomes with orthologs for QEN71_RS17540 only; 40 genomes with orthologs for QEN71_RS02525 only