Conservation of cofitness between Psyr_0820 and Psyr_5065 in Pseudomonas syringae pv. syringae B728a

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0820 transcriptional regulator, LacI family 1.0 Psyr_5065 ATP-dependent DNA helicase UvrD 0.30 20
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0820 transcriptional regulator, LacI family 1.00 Psyr_5065 ATP-dependent DNA helicase UvrD low > 86
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_1147 Fructose repressor FruR, LacI family 0.87 Pf1N1B4_2005 ATP-dependent DNA helicase UvrD/PcrA low > 87
Pseudomonas sp. RS175 0.79 PFR28_00104 Catabolite repressor/activator 0.88 PFR28_04523 DNA helicase II low > 88
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_3340 Fructose repressor FruR, LacI family 0.88 Pf6N2E2_4273 ATP-dependent DNA helicase UvrD/PcrA low > 103
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_07340 transcriptional regulator 0.88 AO356_11990 DNA helicase II low > 104
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_05490 transcriptional regulator 0.89 AO353_10055 DNA helicase II low > 101
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS04005 catabolite repressor/activator 0.89 PFLU_RS29900 DNA helicase II low > 109
Pseudomonas fluorescens SBW25 0.77 PFLU_RS04005 catabolite repressor/activator 0.89 PFLU_RS29900 DNA helicase II low > 109
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_5077 Fructose repressor FruR, LacI family 0.89 PfGW456L13_724 ATP-dependent DNA helicase UvrD/PcrA low > 87
Pseudomonas putida KT2440 0.70 PP_0792 catabolite repressor-activator, DNA-binding transcriptional dual regulator 0.86 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex low > 96
Pseudomonas stutzeri RCH2 0.58 Psest_3356 D-fructose-responsive transcription factor 0.78 Psest_4098 Superfamily I DNA and RNA helicases low > 67
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_16835 catabolite repressor/activator 0.60 CSW01_01015 DNA helicase II low > 62
Pantoea sp. MT58 0.38 IAI47_15980 catabolite repressor/activator 0.61 IAI47_18390 DNA helicase II low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_03579 Catabolite repressor/activator 0.62 OHPLBJKB_04237 DNA helicase II low > 73
Klebsiella michiganensis M5al 0.37 BWI76_RS04705 DNA-binding transcriptional regulator FruR 0.62 BWI76_RS01220 DNA-dependent helicase II low > 92
Escherichia coli BL21 0.37 ECD_00081 transcriptional repressor-activator for carbon metabolism 0.62 ECD_03689 DNA-dependent ATPase I and helicase II — —
Escherichia fergusonii Becca 0.37 EFB2_03967 Catabolite repressor/activator 0.62 EFB2_04824 DNA helicase II low > 86
Escherichia coli Nissle 1917 0.37 ECOLIN_RS00430 catabolite repressor/activator 0.62 ECOLIN_RS21885 DNA helicase II 0.54 25
Escherichia coli BW25113 0.37 b0080 fruR DNA-binding transcriptional dual regulator (NCBI) 0.62 b3813 uvrD DNA-dependent ATPase I and helicase II (NCBI) low > 76
Pectobacterium carotovorum WPP14 0.37 HER17_RS03105 catabolite repressor/activator 0.62 HER17_RS01360 DNA helicase II low > 75
Enterobacter sp. TBS_079 0.37 MPMX20_00773 Catabolite repressor/activator 0.62 MPMX20_04463 DNA helicase II low > 85
Erwinia tracheiphila SCR3 0.37 LU632_RS02900 cra catabolite repressor/activator 0.61 LU632_RS24125 uvrD DNA helicase II — —
Enterobacter asburiae PDN3 0.37 EX28DRAFT_3675 transcriptional regulator, LacI family 0.62 EX28DRAFT_4482 ATP-dependent DNA helicase UvrD (EC 3.6.1.-) low > 76
Escherichia coli ECRC98 0.37 JDDGAC_14280 cra catabolite repressor/activator 0.62 JDDGAC_18035 uvrD DNA helicase II low > 86
Escherichia coli ECOR27 0.37 NOLOHH_03030 cra catabolite repressor/activator 0.62 NOLOHH_06540 uvrD DNA helicase II low > 75
Escherichia coli ECRC100 0.37 OKFHMN_10685 cra catabolite repressor/activator 0.62 OKFHMN_14410 uvrD DNA helicase II low > 80
Escherichia coli ECOR38 0.37 HEPCGN_08665 cra catabolite repressor/activator 0.62 HEPCGN_13115 uvrD DNA helicase II low > 87
Serratia liquefaciens MT49 0.37 IAI46_03385 catabolite repressor/activator 0.62 IAI46_00735 DNA helicase II low > 86
Escherichia coli ECRC62 0.37 BNILDI_08580 cra catabolite repressor/activator 0.62 BNILDI_04995 uvrD DNA helicase II low > 75
Escherichia coli ECRC101 0.37 MCAODC_01200 cra catabolite repressor/activator 0.62 MCAODC_04915 uvrD DNA helicase II low > 87
Escherichia coli ECRC102 0.37 NIAGMN_08535 cra catabolite repressor/activator 0.62 NIAGMN_12165 uvrD DNA helicase II — —
Rahnella sp. WP5 0.37 EX31_RS03655 catabolite repressor/activator 0.60 EX31_RS15175 DNA helicase II low > 89
Escherichia coli ECRC99 0.37 KEDOAH_17470 cra catabolite repressor/activator 0.62 KEDOAH_13740 uvrD DNA helicase II — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF158 Fructose repressor FruR, LacI family 0.62 GFF241 ATP-dependent DNA helicase UvrD/PcrA low > 78
Dickeya dianthicola 67-19 0.37 HGI48_RS18030 catabolite repressor/activator 0.61 HGI48_RS20035 DNA helicase II low > 71
Dickeya dianthicola ME23 0.37 DZA65_RS19175 catabolite repressor/activator 0.62 DZA65_RS21080 DNA helicase II low > 75
Dickeya dadantii 3937 0.37 DDA3937_RS18095 catabolite repressor/activator 0.62 DDA3937_RS19880 DNA helicase II low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.20 CA265_RS18945 LacI family transcriptional regulator 0.32 CA265_RS12980 ATP-dependent DNA helicase — —

Not shown: 3 genomes with orthologs for Psyr_0820 only; 57 genomes with orthologs for Psyr_5065 only