Conservation of cofitness between Psyr_3165 and Psyr_4842 in Pseudomonas syringae pv. syringae B728a

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3165 transcriptional regulator, LysR family 1.0 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase 0.36 19
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3165 transcriptional regulator, LysR family 1.00 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase low > 86
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS07335 LysR family transcriptional regulator 0.91 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase low > 109
Pseudomonas fluorescens SBW25 0.76 PFLU_RS07335 LysR family transcriptional regulator 0.91 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase low > 109
Pseudomonas simiae WCS417 0.76 PS417_07220 LysR family transcriptional regulator 0.91 PS417_26985 phosphoenolpyruvate-protein phosphotransferase low > 88
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_26720 LysR family transcriptional regulator 0.93 AO353_08465 phosphoenolpyruvate-protein phosphotransferase low > 101
Pantoea sp. MT58 0.55 IAI47_10140 LysR family transcriptional regulator 0.38 IAI47_03920 phosphoenolpyruvate--protein phosphotransferase low > 76
Enterobacter asburiae PDN3 0.55 EX28DRAFT_0581 Transcriptional regulator 0.38 EX28DRAFT_2904 phosphoenolpyruvate-protein phosphotransferase low > 76
Enterobacter sp. TBS_079 0.54 MPMX20_02971 HTH-type transcriptional regulator CynR 0.38 MPMX20_03692 Phosphoenolpyruvate-dependent phosphotransferase system low > 85
Pseudomonas putida KT2440 0.49 PP_2054 putative DNA-binding transcriptional regulator 0.92 PP_5145 phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) low > 96
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_4462 LysR family transcriptional regulator YbhD 0.94 Pf1N1B4_2284 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 87
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_28895 LysR family transcriptional regulator 0.93 AO356_10350 phosphoenolpyruvate-protein phosphotransferase low > 104
Pseudomonas sp. RS175 0.47 PFR28_01942 HTH-type transcriptional regulator CynR 0.93 PFR28_04830 Phosphoenolpyruvate-dependent phosphotransferase system low > 88
Azospirillum brasilense Sp245 0.46 AZOBR_RS28100 LysR family transcriptional regulator 0.26 AZOBR_RS18900 peptidase low > 97
Azospirillum sp. SherDot2 0.46 MPMX19_03557 HTH-type transcriptional regulator CynR 0.26 MPMX19_02675 Phosphoenolpyruvate-dependent phosphotransferase system low > 112
Agrobacterium fabrum C58 0.45 Atu4264 LysR family transcriptional regulator 0.25 Atu4173 phosphoenolpyruvate-protein phosphotransferase low > 89
Dickeya dadantii 3937 0.44 DDA3937_RS07805 LysR family transcriptional regulator 0.38 DDA3937_RS04950 phosphoenolpyruvate--protein phosphotransferase low > 74
Escherichia coli ECOR27 0.41 NOLOHH_23100 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.39 NOLOHH_11890 ptsP phosphoenolpyruvate--protein phosphotransferase low > 75
Escherichia coli ECRC62 0.41 BNILDI_21095 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.39 BNILDI_10370 ptsP phosphoenolpyruvate--protein phosphotransferase low > 75
Escherichia coli ECRC102 0.41 NIAGMN_04720 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.39 NIAGMN_17775 ptsP phosphoenolpyruvate--protein phosphotransferase — —
Escherichia coli ECRC99 0.41 KEDOAH_21295 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.39 KEDOAH_08125 ptsP phosphoenolpyruvate--protein phosphotransferase — —
Escherichia coli ECRC101 0.41 MCAODC_25890 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.39 MCAODC_10530 ptsP phosphoenolpyruvate--protein phosphotransferase low > 87
Escherichia coli ECRC98 0.41 JDDGAC_10325 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.39 JDDGAC_23670 ptsP phosphoenolpyruvate--protein phosphotransferase low > 86
Escherichia coli ECRC100 0.41 OKFHMN_06670 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.39 OKFHMN_20005 ptsP phosphoenolpyruvate--protein phosphotransferase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_02945 Hydrogen peroxide-inducible genes activator 0.39 OHPLBJKB_00901 Phosphoenolpyruvate-dependent phosphotransferase system low > 73
Escherichia coli BW25113 0.41 b0768 ybhD predicted DNA-binding transcriptional regulator (RefSeq) 0.39 b2829 ptsP fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) low > 76
Escherichia fergusonii Becca 0.41 EFB2_03338 Hydrogen peroxide-inducible genes activator 0.39 EFB2_01055 Phosphoenolpyruvate-dependent phosphotransferase system low > 86
Escherichia coli Nissle 1917 0.41 ECOLIN_RS04090 LysR family transcriptional regulator 0.39 ECOLIN_RS15875 phosphoenolpyruvate--protein phosphotransferase — —
Escherichia coli ECOR38 0.41 HEPCGN_01605 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.39 HEPCGN_19260 ptsP phosphoenolpyruvate--protein phosphotransferase low > 87
Klebsiella michiganensis M5al 0.40 BWI76_RS04365 LysR family transcriptional regulator 0.39 BWI76_RS23270 phosphoenolpyruvate--protein phosphotransferase PtsP low > 92
Bosea sp. OAE506 0.32 ABIE41_RS16550 LysR family transcriptional regulator 0.26 ABIE41_RS23820 phosphoenolpyruvate--protein phosphotransferase low > 77
Rahnella sp. WP5 0.30 EX31_RS20145 LysR family transcriptional regulator 0.40 EX31_RS13200 phosphoenolpyruvate--protein phosphotransferase low > 89
Sinorhizobium meliloti 1021 0.28 SM_b20123 transcriptional regulator 0.27 SMc02437 phosphoenolpyruvate phosphotransferase PTSP (enzyme I-Ntr) protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF2038 LysR family transcriptional regulator YfeR 0.38 GFF1311 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 78
Serratia liquefaciens MT49 0.28 IAI46_18415 LysR family transcriptional regulator 0.40 IAI46_20450 phosphoenolpyruvate--protein phosphotransferase 0.41 54
Dickeya dianthicola 67-19 0.25 HGI48_RS00115 LysR family transcriptional regulator 0.37 HGI48_RS04960 phosphoenolpyruvate--protein phosphotransferase low > 71
Escherichia coli BL21 0.24 ECD_02308 transcriptional regulator of yefH 0.39 ECD_02677 PEP-protein phosphotransferase enzyme I; GAF domain containing protein low > 61
Marinobacter adhaerens HP15 0.19 HP15_4145 transcriptional regulator, LysR family 0.66 HP15_463 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain protein low > 73
Phaeobacter inhibens DSM 17395 0.18 PGA1_262p01470 transcriptional regulator, LysR family 0.21 PGA1_c23500 phosphoenolpyruvate-protein phosphotransferase PtsP low > 62

Not shown: 17 genomes with orthologs for Psyr_3165 only; 23 genomes with orthologs for Psyr_4842 only