Conservation of cofitness between Psyr_1715 and Psyr_4158 in Pseudomonas syringae pv. syringae B728a

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1715 Exodeoxyribonuclease I subunit D 1.0 Psyr_4158 conserved hypothetical protein 0.42 4
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1715 Exodeoxyribonuclease I subunit D 1.00 Psyr_4158 conserved hypothetical protein low > 86
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_3307 Exonuclease SbcD 0.70 PfGW456L13_5028 FIG005080: Possible exported protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_619 Exonuclease SbcD 0.68 Pf6N2E2_3282 FIG005080: Possible exported protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_23680 exonuclease SbcD 0.70 AO353_05225 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_4633 Exonuclease SbcD 0.71 Pf1N1B4_1094 FIG005080: Possible exported protein — —
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_24630 exonuclease SbcD 0.69 AO356_07105 hypothetical protein low > 104
Pseudomonas sp. DMC3 0.85 GFF3025 Nuclease SbcCD subunit D 0.71 GFF1814 hypothetical protein low > 89
Pseudomonas sp. RS175 0.85 PFR28_01589 Nuclease SbcCD subunit D 0.69 PFR28_00159 hypothetical protein low > 88
Pseudomonas simiae WCS417 0.83 PS417_15115 exonuclease SbcD 0.72 PS417_04275 hypothetical protein low > 88
Pseudomonas fluorescens SBW25 0.82 PFLU_RS17135 exonuclease subunit SbcD 0.70 PFLU_RS04330 TIGR02099 family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS17135 exonuclease subunit SbcD 0.70 PFLU_RS04330 TIGR02099 family protein low > 109
Pseudomonas lactucae CFBP13502 0.82 GEMAOFIL_03324 Nuclease SbcCD subunit D 0.71 GEMAOFIL_01060 hypothetical protein low > 93
Pseudomonas sp. SVBP6 0.79 COO64_RS05450 exonuclease SbcCD subunit D C-terminal domain-containing protein 0.68 COO64_RS04215 YhdP family protein low > 93
Pseudomonas sp. BP01 0.77 JOY50_RS16430 exonuclease SbcCD subunit D C-terminal domain-containing protein 0.64 JOY50_RS11060 YhdP family protein low > 84
Pseudomonas putida KT2440 0.76 PP_2025 Exonuclease SbcD 0.64 PP_0938 conserved protein of unknown function low > 96
Pseudomonas aeruginosa PA14 0.66 IKLFDK_02705 exonuclease SbcCD subunit D 0.50 IKLFDK_01700 TIGR02099 family protein low > 100
Pseudomonas stutzeri RCH2 0.65 Psest_3539 exonuclease SbcD 0.53 Psest_3322 TIGR02099 family protein low > 67
Pseudomonas segetis P6 0.24 MPMX49_03536 Nuclease SbcCD subunit D 0.49 MPMX49_03867 hypothetical protein low > 75
Erwinia tracheiphila SCR3 0.22 LU632_RS18930 sbcD exonuclease subunit SbcD 0.08 LU632_RS21425 yhdP AsmA2 domain-containing protein YhdP low > 74
Erwinia tracheiphila HP pepo 2.2 0.22 IJEDHG_26120 sbcD exonuclease subunit SbcD 0.08 IJEDHG_13585 Protein of unknown function low > 61
Rahnella sp. WP5 0.21 EX31_RS22035 exonuclease subunit SbcD 0.08 EX31_RS12260 AsmA2 domain-containing protein low > 89
Escherichia coli Nissle 1917 0.21 ECOLIN_RS02405 exonuclease subunit SbcD 0.08 ECOLIN_RS18600 AsmA2 domain-containing protein YhdP low > 55
Escherichia fergusonii Becca 0.21 EFB2_03659 Nuclease SbcCD subunit D 0.08 EFB2_00585 hypothetical protein 0.40 6
Pantoea agglomerans CFBP13505 P0401 0.21 PagCFBP13505_RS10290 exonuclease subunit SbcD 0.09 PagCFBP13505_RS11055 AsmA2 domain-containing protein low > 74
Pantoea sp. MT58 0.21 IAI47_14860 exonuclease subunit SbcD 0.09 IAI47_02460 AsmA2 domain-containing protein YhdP low > 76
Escherichia coli ECOR27 0.21 NOLOHH_01480 sbcD exonuclease subunit SbcD 0.08 NOLOHH_09535 yhdP AsmA2 domain-containing protein YhdP low > 76
Escherichia coli ECRC101 0.21 MCAODC_27775 sbcD exonuclease subunit SbcD 0.08 MCAODC_08270 yhdP AsmA2 domain-containing protein YhdP low > 88
Escherichia coli ECRC98 0.21 JDDGAC_12205 sbcD exonuclease subunit SbcD 0.08 JDDGAC_21375 yhdP AsmA2 domain-containing protein YhdP low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_03278 Nuclease SbcCD subunit D 0.08 OHPLBJKB_00459 hypothetical protein low > 74
Escherichia coli ECRC102 0.21 NIAGMN_06605 sbcD exonuclease subunit SbcD 0.08 NIAGMN_15510 yhdP AsmA2 domain-containing protein YhdP low > 80
Escherichia coli BL21 0.21 ECD_00346 exonuclease, dsDNA, ATP-dependent 0.08 ECD_03105 DUF3971-AsmA2 domains protein low > 61
Escherichia coli ECRC100 0.21 OKFHMN_08550 sbcD exonuclease subunit SbcD 0.08 OKFHMN_17750 yhdP AsmA2 domain-containing protein YhdP low > 79
Escherichia coli ECRC99 0.21 KEDOAH_19415 sbcD exonuclease subunit SbcD 0.08 KEDOAH_10400 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli ECOR38 0.21 HEPCGN_07190 sbcD exonuclease subunit SbcD 0.08 HEPCGN_16615 yhdP AsmA2 domain-containing protein YhdP low > 88
Escherichia coli ECRC62 0.21 BNILDI_22895 sbcD exonuclease subunit SbcD 0.08 BNILDI_01985 yhdP AsmA2 domain-containing protein YhdP low > 75
Escherichia coli BW25113 0.21 b0398 sbcD exonuclease, dsDNA, ATP-dependent (NCBI) 0.08 b4472 yhdP conserved membrane protein, predicted transporter (NCBI) low > 76
Klebsiella michiganensis M5al 0.20 BWI76_RS06225 exonuclease sbcCD subunit D 0.09 BWI76_RS25475 TIGR02099 family protein low > 92
Pectobacterium carotovorum WPP14 0.20 HER17_RS16045 exonuclease subunit SbcD 0.10 HER17_RS20145 AsmA2 domain-containing protein YhdP low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.20 GFF4294 Exonuclease SbcD 0.09 GFF2139 FIG005080: Possible exported protein 0.32 39
Erwinia amylovora T8 0.20 OLJFJH_18190 exonuclease subunit SbcD 0.08 OLJFJH_06935 DUF3971 domain-containing protein low > 58
Klebsiella pneumoniae MKP103 0.20 KDGMDA_14300 exonuclease subunit SbcD 0.09 KDGMDA_06250 AsmA2 domain-containing protein low > 95
Dickeya dianthicola 67-19 0.20 HGI48_RS05480 exonuclease subunit SbcD 0.10 HGI48_RS01375 AsmA2 domain-containing protein YhdP low > 71
Dickeya dianthicola ME23 0.20 DZA65_RS05805 exonuclease subunit SbcD 0.10 DZA65_RS01435 AsmA2 domain-containing protein low > 75
Dickeya dadantii 3937 0.20 DDA3937_RS05420 exonuclease subunit SbcD 0.10 DDA3937_RS01455 AsmA2 domain-containing protein YhdP low > 74
Serratia liquefaciens MT49 0.19 IAI46_04770 exonuclease subunit SbcD 0.09 IAI46_22695 AsmA2 domain-containing protein YhdP 0.42 72
Enterobacter asburiae PDN3 0.19 EX28DRAFT_2576 Exodeoxyribonuclease I subunit D (EC 3.1.11.1) 0.09 EX28DRAFT_3296 TIGR02099 family protein low > 76

Not shown: 12 genomes with orthologs for Psyr_1715 only; 25 genomes with orthologs for Psyr_4158 only