Conservation of cofitness between Psyr_3863 and Psyr_3521 in Pseudomonas syringae pv. syringae B728a

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3863 SEC-C motif protein 1.0 Psyr_3521 transcriptional regulator, LysR family 0.43 1
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3863 SEC-C motif protein 1.00 Psyr_3521 transcriptional regulator, LysR family low > 86
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_16995 hypothetical protein 0.72 AO353_15505 LysR family transcriptional regulator low > 101
Pseudomonas simiae WCS417 0.84 PS417_06485 hypothetical protein 0.69 PS417_05080 LysR family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_3187 UPF0225 protein YchJ 0.71 Pf1N1B4_1012 Glycine cleavage system transcriptional activator low > 87
Pseudomonas fluorescens SBW25 0.82 PFLU_RS06515 YchJ family protein 0.69 PFLU_RS05140 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS06515 YchJ family protein 0.69 PFLU_RS05140 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_4631 UPF0225 protein YchJ 0.71 PfGW456L13_4953 Glycine cleavage system transcriptional activator low > 87
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_05460 hypothetical protein 0.27 AO356_15125 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_2949 UPF0225 protein YchJ 0.27 Pf6N2E2_4960 Transcriptional regulator, LysR family low > 103
Pseudomonas putida KT2440 0.79 PP_1119 conserved protein of unknown function 0.68 PP_3143 Transcriptional regulator, LysR family low > 96
Klebsiella michiganensis M5al 0.40 BWI76_RS17285 hypothetical protein 0.30 BWI76_RS22955 transcriptional regulator GcvA low > 92
Magnetospirillum magneticum AMB-1 0.39 AMB_RS00035 hypothetical protein 0.23 AMB_RS04220 transcriptional regulator GcvA low > 64
Enterobacter sp. TBS_079 0.38 MPMX20_02595 hypothetical protein 0.30 MPMX20_03671 Glycine cleavage system transcriptional activator low > 85
Enterobacter asburiae PDN3 0.38 EX28DRAFT_0859 Uncharacterized protein conserved in bacteria 0.29 EX28DRAFT_2883 Transcriptional regulator low > 76
Erwinia tracheiphila SCR3 0.37 LU632_RS12935 YchJ family protein 0.29 LU632_RS06255 transcriptional regulator GcvA low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_02452 hypothetical protein 0.31 OHPLBJKB_00923 Glycine cleavage system transcriptional activator low > 73
Escherichia coli ECRC99 0.35 KEDOAH_25570 ychJ YchJ family protein 0.31 KEDOAH_08010 gcvA glycine cleavage system transcriptional regulator GcvA — —
Escherichia coli BW25113 0.35 b1233 ychJ hypothetical protein (NCBI) 0.31 b2808 gcvA DNA-binding transcriptional dual regulator (NCBI) low > 76
Escherichia coli ECOR27 0.35 NOLOHH_20475 ychJ YchJ family protein 0.31 NOLOHH_12000 gcvA glycine cleavage system transcriptional regulator GcvA low > 75
Escherichia coli Nissle 1917 0.35 ECOLIN_RS07465 YchJ family protein 0.31 ECOLIN_RS15650 glycine cleavage system transcriptional regulator GcvA — —
Escherichia coli ECOR38 0.35 HEPCGN_25035 ychJ YchJ family protein 0.31 HEPCGN_19375 gcvA glycine cleavage system transcriptional regulator GcvA low > 87
Escherichia coli ECRC100 0.35 OKFHMN_28575 ychJ YchJ family protein 0.31 OKFHMN_20120 gcvA glycine cleavage system transcriptional regulator GcvA low > 80
Escherichia coli BL21 0.35 ECD_01209 UPF0225 family protein 0.31 ECD_02659 glycine cleavage system transcriptional activator; autorepressor 0.32 55
Escherichia coli ECRC102 0.35 NIAGMN_27660 ychJ YchJ family protein 0.31 NIAGMN_17890 gcvA glycine cleavage system transcriptional regulator GcvA — —
Escherichia coli ECRC62 0.35 BNILDI_18630 ychJ YchJ family protein 0.31 BNILDI_10505 gcvA glycine cleavage system transcriptional regulator GcvA low > 75
Escherichia coli ECRC101 0.35 MCAODC_21685 ychJ YchJ family protein 0.31 MCAODC_10645 gcvA glycine cleavage system transcriptional regulator GcvA low > 87
Escherichia coli ECRC98 0.35 JDDGAC_06000 ychJ YchJ family protein 0.31 JDDGAC_23785 gcvA glycine cleavage system transcriptional regulator GcvA low > 86
Pectobacterium carotovorum WPP14 0.34 HER17_RS11060 YchJ family protein 0.29 HER17_RS16415 transcriptional regulator GcvA low > 75
Escherichia fergusonii Becca 0.34 EFB2_02693 hypothetical protein 0.31 EFB2_01109 Glycine cleavage system transcriptional activator low > 86
Pantoea sp. MT58 0.33 IAI47_09015 YchJ family protein 0.31 IAI47_04025 transcriptional regulator GcvA low > 76
Rhodospirillum rubrum S1H 0.33 Rru_A1982 SEC-C domain protein (NCBI) 0.30 Rru_A2214 Transcriptional Regulator, LysR family (NCBI) low > 58
Dickeya dianthicola 67-19 0.32 HGI48_RS10340 YchJ family protein 0.30 HGI48_RS05050 transcriptional regulator GcvA low > 71
Dickeya dianthicola ME23 0.31 DZA65_RS10815 YchJ family protein 0.30 DZA65_RS05390 transcriptional regulator GcvA low > 75
Dickeya dadantii 3937 0.30 DDA3937_RS10330 YchJ family protein 0.30 DDA3937_RS05050 transcriptional regulator GcvA low > 74
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_02092 SEC-C motif-containing protein 0.27 H281DRAFT_03788 transcriptional regulator, LysR family low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.25 GFF1717 UPF0225 protein YchJ 0.23 GFF4447 D-serine dehydratase transcriptional activator low > 90
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS16820 YchJ family metal-binding protein 0.25 ABZR86_RS17345 transcriptional regulator GcvA low > 74
Paraburkholderia graminis OAS925 0.22 ABIE53_000587 SEC-C motif-containing protein 0.26 ABIE53_004463 LysR family transcriptional regulator of beta-lactamase low > 113

Not shown: 21 genomes with orthologs for Psyr_3863 only; 17 genomes with orthologs for Psyr_3521 only