Conservation of cofitness between Psyr_0820 and Psyr_2089 in Pseudomonas syringae pv. syringae B728a

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0820 transcriptional regulator, LacI family 1.0 Psyr_2089 Protein of unknown function DUF299 0.43 7
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0820 transcriptional regulator, LacI family 1.00 Psyr_2089 Protein of unknown function DUF299 low > 86
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_1147 Fructose repressor FruR, LacI family 0.92 Pf1N1B4_3824 FIG137360: hypothetical protein low > 87
Pseudomonas sp. RS175 0.79 PFR28_00104 Catabolite repressor/activator 0.93 PFR28_01037 Phosphoenolpyruvate synthase regulatory protein 0.46 23
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_07340 transcriptional regulator 0.93 AO356_02830 transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_3340 Fructose repressor FruR, LacI family 0.93 Pf6N2E2_2391 FIG137360: hypothetical protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_05490 transcriptional regulator 0.94 AO353_00875 transcriptional regulator low > 101
Pseudomonas fluorescens SBW25 0.77 PFLU_RS04005 catabolite repressor/activator 0.94 PFLU_RS22635 kinase/pyrophosphorylase 0.90 2
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS04005 catabolite repressor/activator 0.94 PFLU_RS22635 kinase/pyrophosphorylase 0.29 6
Pseudomonas simiae WCS417 0.76 PS417_03960 transcriptional regulator 0.94 PS417_21025 PEP synthetase regulatory protein — —
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_5077 Fructose repressor FruR, LacI family 0.92 PfGW456L13_4113 FIG137360: hypothetical protein low > 87
Pseudomonas putida KT2440 0.70 PP_0792 catabolite repressor-activator, DNA-binding transcriptional dual regulator 0.92 PP_2081 putative phosphoenolpyruvate synthase regulatory protein low > 96
Pseudomonas stutzeri RCH2 0.58 Psest_3356 D-fructose-responsive transcription factor 0.89 Psest_2317 Uncharacterized protein conserved in bacteria low > 67
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_16835 catabolite repressor/activator 0.39 CSW01_19045 phosphoenolpyruvate synthase regulatory protein low > 62
Pantoea sp. MT58 0.38 IAI47_15980 catabolite repressor/activator 0.49 IAI47_10910 kinase/pyrophosphorylase low > 76
Escherichia coli Nissle 1917 0.37 ECOLIN_RS00430 catabolite repressor/activator 0.48 ECOLIN_RS09520 posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR — —
Escherichia coli BW25113 0.37 b0080 fruR DNA-binding transcriptional dual regulator (NCBI) 0.48 b1703 ydiA hypothetical protein (NCBI) low > 76
Escherichia coli BL21 0.37 ECD_00081 transcriptional repressor-activator for carbon metabolism 0.48 ECD_01672 PEP synthase kinase and PEP synthase pyrophosphorylase — —
Escherichia fergusonii Becca 0.37 EFB2_03967 Catabolite repressor/activator 0.48 EFB2_02288 Phosphoenolpyruvate synthase regulatory protein low > 86
Klebsiella michiganensis M5al 0.37 BWI76_RS04705 DNA-binding transcriptional regulator FruR 0.47 BWI76_RS17070 phosphoenolpyruvate synthase regulatory protein low > 92
Pectobacterium carotovorum WPP14 0.37 HER17_RS03105 catabolite repressor/activator 0.49 HER17_RS08880 kinase/pyrophosphorylase low > 75
Enterobacter sp. TBS_079 0.37 MPMX20_00773 Catabolite repressor/activator 0.47 MPMX20_01921 Phosphoenolpyruvate synthase regulatory protein low > 85
Erwinia tracheiphila SCR3 0.37 LU632_RS02900 cra catabolite repressor/activator 0.48 LU632_RS11015 kinase/pyrophosphorylase low > 74
Enterobacter asburiae PDN3 0.37 EX28DRAFT_3675 transcriptional regulator, LacI family 0.47 EX28DRAFT_1705 Uncharacterized protein conserved in bacteria 0.61 60
Escherichia coli ECRC102 0.37 NIAGMN_08535 cra catabolite repressor/activator 0.48 NIAGMN_00925 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR — —
Escherichia coli ECOR27 0.37 NOLOHH_03030 cra catabolite repressor/activator 0.48 NOLOHH_17660 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR — —
Escherichia coli ECRC62 0.37 BNILDI_08580 cra catabolite repressor/activator 0.48 BNILDI_16450 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR low > 75
Escherichia coli ECOR38 0.37 HEPCGN_08665 cra catabolite repressor/activator 0.48 HEPCGN_05505 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR low > 87
Rahnella sp. WP5 0.37 EX31_RS03655 catabolite repressor/activator 0.51 EX31_RS13940 kinase/pyrophosphorylase low > 89
Serratia liquefaciens MT49 0.37 IAI46_03385 catabolite repressor/activator 0.49 IAI46_11110 kinase/pyrophosphorylase low > 86
Escherichia coli ECRC101 0.37 MCAODC_01200 cra catabolite repressor/activator 0.48 MCAODC_18270 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR low > 87
Escherichia coli ECRC98 0.37 JDDGAC_14280 cra catabolite repressor/activator 0.48 JDDGAC_01715 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR low > 86
Escherichia coli ECRC100 0.37 OKFHMN_10685 cra catabolite repressor/activator 0.48 OKFHMN_27140 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.57 29
Escherichia coli ECRC99 0.37 KEDOAH_17470 cra catabolite repressor/activator 0.48 KEDOAH_00970 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR — —
Dickeya dianthicola ME23 0.37 DZA65_RS19175 catabolite repressor/activator 0.49 DZA65_RS13345 kinase/pyrophosphorylase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF158 Fructose repressor FruR, LacI family 0.47 GFF3537 FIG137360: hypothetical protein low > 78
Dickeya dianthicola 67-19 0.37 HGI48_RS18030 catabolite repressor/activator 0.49 HGI48_RS12880 kinase/pyrophosphorylase low > 71
Dickeya dadantii 3937 0.37 DDA3937_RS18095 catabolite repressor/activator 0.49 DDA3937_RS12810 kinase/pyrophosphorylase low > 74
Agrobacterium fabrum C58 0.15 Atu4743 LacI family transcriptional regulator 0.20 Atu0001 hypothetical protein low > 89
Sinorhizobium meliloti 1021 0.14 SM_b20483 catabolite repressor protein 0.17 SMc02793 hypothetical protein low > 103

Not shown: 2 genomes with orthologs for Psyr_0820 only; 43 genomes with orthologs for Psyr_2089 only