Conservation of cofitness between Psyr_2132 and Psyr_1809 in Pseudomonas syringae pv. syringae B728a

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2132 shikimate dehydrogenase 1.0 Psyr_1809 Polysaccharide deacetylase 0.28 9
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2132 shikimate dehydrogenase 1.00 Psyr_1809 Polysaccharide deacetylase low > 86
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_06175 shikimate dehydrogenase 0.91 AO353_02320 allantoinase low > 101
Pseudomonas putida KT2440 0.73 PP_2406 putative quinate/shikimate dehydrogenase 0.91 PP_4286 allantoinase low > 96
Pseudomonas fluorescens SBW25 0.73 PFLU_RS26360 shikimate dehydrogenase 0.92 PFLU_RS21385 allantoinase PuuE low > 109
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_1427 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) 0.91 PfGW456L13_4180 Uricase (urate oxidase) (EC 1.7.3.3) low > 87
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS26360 shikimate dehydrogenase 0.92 PFLU_RS21385 allantoinase PuuE low > 109
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_5061 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) 0.91 Pf6N2E2_5805 Uricase (urate oxidase) (EC 1.7.3.3) low > 103
Pseudomonas simiae WCS417 0.72 PS417_24435 shikimate dehydrogenase 0.91 PS417_19415 allantoinase low > 88
Pseudomonas sp. RS175 0.72 PFR28_03811 Quinate/shikimate dehydrogenase (NAD(+)) 0.90 PFR28_03143 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_15590 shikimate dehydrogenase 0.90 AO356_19460 allantoinase (EC 3.5.2.5) (from data) low > 104
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_2749 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) 0.92 Pf1N1B4_3766 Uricase (urate oxidase) (EC 1.7.3.3) low > 87
Azospirillum sp. SherDot2 0.57 MPMX19_03526 Quinate/shikimate dehydrogenase (NAD(+)) 0.66 MPMX19_04444 hypothetical protein low > 112
Ralstonia solanacearum PSI07 0.56 RPSI07_RS06205 shikimate dehydrogenase 0.64 RPSI07_RS14065 allantoinase PuuE low > 81
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS22685 shikimate 5-dehydrogenase 0.62 BPHYT_RS11555 allantoinase low > 109
Ralstonia solanacearum GMI1000 0.54 RS_RS23870 shikimate dehydrogenase 0.64 RS_RS10635 allantoinase PuuE low > 80
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS17445 shikimate dehydrogenase 0.65 RALBFv3_RS03245 allantoinase PuuE low > 76
Ralstonia solanacearum UW163 0.52 UW163_RS21705 shikimate dehydrogenase 0.65 UW163_RS10480 allantoinase PuuE — —
Sinorhizobium meliloti 1021 0.52 SM_b20037 shikimate 5-dehydrogenase 0.60 SM_b20875 hypothetical protein low > 103
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_03216 shikimate dehydrogenase (EC 1.1.1.25) 0.61 H281DRAFT_05158 putative urate catabolism protein low > 103
Acidovorax sp. GW101-3H11 0.47 Ac3H11_1226 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) 0.58 Ac3H11_1095 Uricase (urate oxidase) (EC 1.7.3.3) low > 79
Castellaniella sp019104865 MT123 0.45 ABCV34_RS11525 shikimate dehydrogenase 0.61 ABCV34_RS06095 allantoinase PuuE low > 48
Agrobacterium fabrum C58 0.44 Atu4532 shikimate 5-dehydrogenase 0.60 Atu2328 hypothetical protein low > 89
Klebsiella michiganensis M5al 0.21 BWI76_RS04655 shikimate dehydrogenase 0.58 BWI76_RS10540 allantoinase low > 92
Hydrogenophaga sp. GW460-11-11-14-LB1 0.18 GFF5018 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.52 GFF3309 Uricase (urate oxidase) (EC 1.7.3.3) low > 90
Variovorax sp. OAS795 0.15 ABID97_RS28755 shikimate dehydrogenase 0.59 ABID97_RS22210 allantoinase PuuE low > 91
Variovorax sp. SCN45 0.14 GFF2599 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.59 GFF1815 Uricase (urate oxidase) (EC 1.7.3.3) low > 127

Not shown: 11 genomes with orthologs for Psyr_2132 only; 20 genomes with orthologs for Psyr_1809 only