Conservation of cofitness between Psyr_0147 and Psyr_1133 in Pseudomonas syringae pv. syringae B728a

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0147 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein 1.0 Psyr_1133 Fimbrial biogenesis outer membrane usher protein 0.28 11
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0147 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein 1.00 Psyr_1133 Fimbrial biogenesis outer membrane usher protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_28220 hydroxyacid dehydrogenase 0.45 AO353_18145 fimbrial protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_4909 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.09 Pf1N1B4_2137 Beta-fimbriae usher protein — —
Pseudomonas lactucae CFBP13502 0.77 GEMAOFIL_03841 Glyoxylate/hydroxypyruvate reductase A 0.29 GEMAOFIL_00606 Outer membrane usher protein HtrE low > 93
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS19730 glyoxylate/hydroxypyruvate reductase A 0.21 PFLU_RS07925 fimbrial biogenesis outer membrane usher protein low > 109
Pseudomonas fluorescens SBW25 0.77 PFLU_RS19730 glyoxylate/hydroxypyruvate reductase A 0.21 PFLU_RS07925 fimbrial biogenesis outer membrane usher protein low > 109
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS32025 glyoxylate/hydroxypyruvate reductase A 0.29 QEN71_RS17185 fimbria/pilus outer membrane usher protein low > 153
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS21550 glyoxylate/hydroxypyruvate reductase A 0.40 ABZR87_RS09390 fimbria/pilus outer membrane usher protein low > 80
Paraburkholderia graminis OAS925 0.55 ABIE53_005027 glyoxylate/hydroxypyruvate reductase A 0.25 ABIE53_001303 outer membrane usher protein low > 113
Pantoea agglomerans CFBP13505 P0401 0.53 PagCFBP13505_RS01525 glyoxylate/hydroxypyruvate reductase A 0.26 PagCFBP13505_RS17140 outer membrane usher protein FimD low > 74
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS30215 D-2-hydroxyacid dehydrogenase 0.28 BPHYT_RS34285 fimbrial biogenesis outer membrane usher protein — —
Pantoea sp. MT58 0.52 IAI47_07630 glyoxylate/hydroxypyruvate reductase A 0.26 IAI47_07315 fimbrial biogenesis usher protein low > 76
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS27410 hydroxyacid dehydrogenase 0.27 RR42_RS09690 fimbrial protein low > 128
Klebsiella michiganensis M5al 0.35 BWI76_RS21910 glyoxylate/hydroxypyruvate reductase A 0.28 BWI76_RS23570 fimbrial protein low > 92
Klebsiella pneumoniae MKP103 0.35 KDGMDA_02575 glyoxylate/hydroxypyruvate reductase A 0.29 KDGMDA_04135 outer membrane usher protein low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3313 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.27 GFF4451 Outer membrane usher protein SfmD low > 78
Rahnella sp. WP5 0.33 EX31_RS17370 glyoxylate/hydroxypyruvate reductase GhrA 0.27 EX31_RS04425 fimbrial biogenesis outer membrane usher protein low > 89
Escherichia fergusonii Becca 0.32 EFB2_02940 Glyoxylate/hydroxypyruvate reductase A 0.29 EFB2_04127 Outer membrane usher protein FimD low > 86
Escherichia coli ECRC100 0.32 OKFHMN_03880 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.29 OKFHMN_11590 fimD fimbrial usher FimD low > 79
Escherichia coli ECRC101 0.32 MCAODC_23240 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.29 MCAODC_02105 fimD fimbrial usher FimD low > 88
Escherichia coli ECRC98 0.32 JDDGAC_07540 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.29 JDDGAC_15185 fimD fimbrial usher FimD low > 87
Escherichia coli BL21 0.32 ECD_01030 glyoxylate/hydroxypyruvate reductase A 0.30 ECD_04186 fimbrial usher outer membrane porin protein; FimCD chaperone-usher low > 61
Escherichia coli ECRC102 0.32 NIAGMN_23950 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.29 NIAGMN_09440 fimD fimbrial usher FimD low > 80
Escherichia coli ECRC99 0.32 KEDOAH_23875 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.29 KEDOAH_16555 fimD fimbrial usher FimD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_02633 Glyoxylate/hydroxypyruvate reductase A 0.29 OHPLBJKB_03750 Outer membrane usher protein FimD low > 74
Serratia liquefaciens MT49 0.32 IAI46_09955 glyoxylate/hydroxypyruvate reductase GhrA 0.27 IAI46_07750 fimbrial biogenesis outer membrane usher protein low > 86
Escherichia coli BW25113 0.32 b1033 ycdW putative dehydrogenase (VIMSS) 0.29 b4317 fimD outer membrane usher protein, type 1 fimbrial synthesis (NCBI) low > 76
Escherichia coli ECOR27 0.32 NOLOHH_21410 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.29 NOLOHH_03915 fimD fimbrial usher FimD low > 76
Escherichia coli ECRC62 0.32 BNILDI_19570 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.29 BNILDI_07680 fimD fimbrial usher FimD low > 75
Escherichia coli ECOR38 0.32 HEPCGN_23610 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.30 HEPCGN_09605 fimD fimbrial usher FimD low > 88
Escherichia coli Nissle 1917 0.32 ECOLIN_RS06000 glyoxylate/hydroxypyruvate reductase GhrA 0.30 ECOLIN_RS24780 fimbrial usher FimD — —
Enterobacter asburiae PDN3 0.30 EX28DRAFT_1896 Phosphoglycerate dehydrogenase and related dehydrogenases 0.26 EX28DRAFT_2190 P pilus assembly protein, porin PapC low > 76
Enterobacter sp. TBS_079 0.30 MPMX20_01715 Glyoxylate/hydroxypyruvate reductase A 0.26 MPMX20_01111 Outer membrane usher protein SfmD low > 85
Lysobacter sp. OAE881 0.26 ABIE51_RS10035 glyoxylate/hydroxypyruvate reductase A 0.29 ABIE51_RS00405 fimbria/pilus outer membrane usher protein low > 62

Not shown: 31 genomes with orthologs for Psyr_0147 only; 13 genomes with orthologs for Psyr_1133 only