Conservation of cofitness between Psyr_0366 and Psyr_0290 in Pseudomonas syringae pv. syringae B728a

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0366 transcriptional regulator, GntR family 1.0 Psyr_0290 ThiJ/PfpI 0.33 6
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0366 transcriptional regulator, GntR family 1.00 Psyr_0290 ThiJ/PfpI low > 86
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_329 Histidine utilization repressor 0.85 PfGW456L13_870 Sigma cross-reacting protein 27A low > 87
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_3807 Histidine utilization repressor 0.84 Pf6N2E2_4449 Sigma cross-reacting protein 27A low > 103
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_09640 histidine utilization repressor 0.86 AO356_12875 isoprenoid biosynthesis protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_12240 histidine utilization repressor 0.81 AO353_08905 isoprenoid biosynthesis protein low > 101
Pseudomonas sp. RS175 0.81 PFR28_04963 HTH-type transcriptional repressor NagR 0.85 PFR28_04349 Glyoxalase ElbB low > 88
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_1590 Histidine utilization repressor 0.86 Pf1N1B4_2204 Sigma cross-reacting protein 27A low > 87
Pseudomonas simiae WCS417 0.80 PS417_01710 histidine utilization repressor 0.84 PS417_27455 isoprenoid biosynthesis protein low > 88
Pseudomonas fluorescens SBW25 0.80 PFLU_RS01765 histidine utilization repressor 0.84 PFLU_RS29115 isoprenoid biosynthesis glyoxalase ElbB low > 109
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS01765 histidine utilization repressor 0.84 PFLU_RS29115 isoprenoid biosynthesis glyoxalase ElbB low > 109
Pseudomonas putida KT2440 0.79 PP_5035 Histidine utilization repressor 0.80 PP_5220 putative hydrolase low > 96
Dickeya dadantii 3937 0.59 DDA3937_RS15020 histidine utilization repressor 0.57 DDA3937_RS01680 isoprenoid biosynthesis glyoxalase ElbB low > 74
Dickeya dianthicola ME23 0.58 DZA65_RS15850 histidine utilization repressor 0.57 DZA65_RS01650 isoprenoid biosynthesis glyoxalase ElbB low > 75
Dickeya dianthicola 67-19 0.58 HGI48_RS15100 histidine utilization repressor 0.57 HGI48_RS01575 isoprenoid biosynthesis glyoxalase ElbB low > 71
Serratia liquefaciens MT49 0.58 IAI46_10615 histidine utilization repressor 0.57 IAI46_22330 isoprenoid biosynthesis glyoxalase ElbB low > 86
Enterobacter sp. TBS_079 0.58 MPMX20_01398 HTH-type transcriptional repressor NagR 0.59 MPMX20_04114 Glyoxalase ElbB low > 85
Klebsiella michiganensis M5al 0.58 BWI76_RS08730 histidine utilization repressor 0.57 BWI76_RS25295 glutamine amidotransferase low > 92
Enterobacter asburiae PDN3 0.57 EX28DRAFT_2221 histidine utilization repressor, proteobacterial 0.58 EX28DRAFT_3262 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF665 Histidine utilization repressor 0.57 GFF2953 Sigma cross-reacting protein 27A low > 78
Shewanella loihica PV-4 0.43 Shew_3758 histidine utilization repressor (RefSeq) 0.55 Shew_3713 isoprenoid biosynthesis protein (RefSeq) low > 60
Azospirillum sp. SherDot2 0.41 MPMX19_04937 Mannosyl-D-glycerate transport/metabolism system repressor MngR 0.47 MPMX19_01890 Glyoxalase ElbB 0.53 82
Shewanella amazonensis SB2B 0.41 Sama_0081 histidine utilization repressor (RefSeq) 0.55 Sama_0094 isoprenoid biosynthesis protein with amidotransferase-like domain (RefSeq) 0.31 10
Shewanella sp. ANA-3 0.41 Shewana3_0099 histidine utilization repressor (RefSeq) 0.59 Shewana3_4108 isoprenoid biosynthesis protein with amidotransferase-like domain (RefSeq) low > 73
Shewanella oneidensis MR-1 0.40 SO0096 hutC histidine utilization repressor (NCBI ptt file) 0.58 SO4670 elbB enhancing lycopene biosynthesis protein (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_06100 histidine utilization repressor 0.58 CSW01_17270 isoprenoid biosynthesis protein ElbB low > 62
Rhodospirillum rubrum S1H 0.39 Rru_A1294 Transcriptional Regulator, Histidine utilization repressor, GntR family (NCBI) 0.43 Rru_A3231 ThiJ/PfpI (NCBI) low > 58
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_1434 histidine utilization repressor, proteobacterial 0.59 B158DRAFT_0508 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis low > 40
Pseudomonas sp. S08-1 0.36 OH686_16760 histidine utilization repressor 0.74 OH686_13980 Enhancing lycopene biosynthesis protein 2 low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.15 OHPLBJKB_00328 putative fructoselysine utilization operon transcriptional repressor 0.57 OHPLBJKB_00491 Glyoxalase ElbB low > 73
Escherichia coli BW25113 0.15 b3375 yhfR putative transcriptional regulator (VIMSS) 0.57 b3209 yhbL sigma cross-reacting protein 27A (SCRP-27A) (VIMSS) low > 76
Escherichia coli BL21 0.15 ECD_03225 putative DNA-binding transcriptional regulator 0.57 ECD_03074 isoprenoid biosynthesis protein with amidotransferase-like domain low > 61
Pectobacterium carotovorum WPP14 0.12 HER17_RS13540 GntR family transcriptional regulator 0.60 HER17_RS19895 isoprenoid biosynthesis glyoxalase ElbB low > 75

Not shown: 26 genomes with orthologs for Psyr_0366 only; 14 genomes with orthologs for Psyr_0290 only