Conservation of cofitness between Psyr_1330 and Psyr_0026 in Pseudomonas syringae pv. syringae B728a

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1330 23S rRNA m(1)G-745 methyltransferase 1.0 Psyr_0026 Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter 0.41 14
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1330 23S rRNA m(1)G-745 methyltransferase 1.00 Psyr_0026 Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter low > 86
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_16405 SAM-dependent methyltransferase 0.77 AO353_10675 SulP family inorganic anion transporter low > 101
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_06095 SAM-dependent methyltransferase 0.74 AO356_11320 SulP family inorganic anion transporter low > 104
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_3070 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) 0.78 Pf1N1B4_1905 Sulfate permease low > 87
Pseudomonas sp. SVBP6 0.86 COO64_RS19580 putative RNA methyltransferase 0.72 COO64_RS02255 SulP family inorganic anion transporter low > 93
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_3084 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) 0.76 Pf6N2E2_4131 Sulfate permease low > 103
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_4722 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) 0.78 PfGW456L13_643 Sulfate permease low > 87
Pseudomonas lactucae CFBP13502 0.85 GEMAOFIL_01400 23S rRNA (guanine(745)-N(1))-methyltransferase 0.80 GEMAOFIL_00232 C4-dicarboxylic acid transporter DauA low > 96
Pseudomonas simiae WCS417 0.85 PS417_06150 SAM-dependent methlyltransferase 0.80 PS417_00130 SulP family inorganic anion transporter low > 88
Pseudomonas fluorescens SBW25 0.85 PFLU_RS06215 methyltransferase domain-containing protein 0.83 PFLU_RS00125 SulP family inorganic anion transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS06215 methyltransferase domain-containing protein 0.83 PFLU_RS00125 SulP family inorganic anion transporter low > 109
Pseudomonas orientalis W4I3 0.85 QF045_RS08995 methyltransferase domain-containing protein 0.78 QF045_RS03065 SulP family inorganic anion transporter low > 93
Pseudomonas sp. DMC3 0.84 GFF2041 23S rRNA (guanine(745)-N(1))-methyltransferase 0.75 GFF601 C4-dicarboxylic acid transporter DauA low > 89
Pseudomonas putida KT2440 0.84 PP_1524 23S rRNA m1G745 methyltransferase 0.70 PP_0075 putative choline sulfate transporter low > 96
Pseudomonas sp. RS175 0.84 PFR28_00385 23S rRNA (guanine(745)-N(1))-methyltransferase 0.76 PFR28_04654 C4-dicarboxylic acid transporter DauA low > 88
Pseudomonas stutzeri RCH2 0.80 Psest_1617 Methylase involved in ubiquinone/menaquinone biosynthesis 0.22 Psest_1787 high affinity sulphate transporter 1 low > 67
Pseudomonas sp. BP01 0.80 JOY50_RS26130 putative RNA methyltransferase 0.73 JOY50_RS08205 SulP family inorganic anion transporter low > 84
Pseudomonas segetis P6 0.73 MPMX49_03473 23S rRNA (guanine(745)-N(1))-methyltransferase 0.70 MPMX49_00283 C4-dicarboxylic acid transporter DauA low > 75
Pseudomonas aeruginosa PUPa3 0.71 DQ20_RS46185 methyltransferase domain-containing protein 0.53 DQ20_RS58750 SulP family inorganic anion transporter low > 101
Pseudomonas aeruginosa MRSN321 0.71 DY961_RS06615 methyltransferase domain-containing protein 0.53 DY961_RS26345 SulP family inorganic anion transporter 0.24 34
Pseudomonas aeruginosa PA14 0.71 IKLFDK_05375 SAM-dependent methyltransferase 0.53 IKLFDK_25415 SulP family inorganic anion transporter low > 98
Escherichia coli Nissle 1917 0.37 ECOLIN_RS10140 23S rRNA (guanine(745)-N(1))-methyltransferase 0.16 ECOLIN_RS07295 C4-dicarboxylic acid transporter DauA — —
Escherichia fergusonii Becca 0.37 EFB2_02178 23S rRNA (guanine(745)-N(1))-methyltransferase 0.16 EFB2_02721 C4-dicarboxylic acid transporter DauA low > 86
Escherichia coli ECOR38 0.37 HEPCGN_04900 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.16 HEPCGN_24890 dauA C4-dicarboxylic acid transporter DauA low > 88
Escherichia coli ECOR27 0.37 NOLOHH_17025 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.17 NOLOHH_20635 dauA C4-dicarboxylic acid transporter DauA low > 76
Escherichia coli BL21 0.37 ECD_01792 23S rRNA m(1)G745 methyltransferase, SAM-dependent 0.16 ECD_01181 C4-dicarboxylic acid transporter 0.56 6
Escherichia coli ECRC98 0.37 JDDGAC_01075 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.16 JDDGAC_06150 dauA C4-dicarboxylic acid transporter DauA low > 87
Escherichia coli BW25113 0.37 b1822 rrmA 23S rRNA m1G745 methyltransferase (NCBI) 0.16 b1206 ychM orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC100 0.37 OKFHMN_26500 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.16 OKFHMN_28425 dauA C4-dicarboxylic acid transporter DauA low > 79
Escherichia coli ECRC99 0.37 KEDOAH_01605 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.16 KEDOAH_25420 dauA C4-dicarboxylic acid transporter DauA — —
Escherichia coli ECRC102 0.37 NIAGMN_01560 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.16 NIAGMN_27810 dauA C4-dicarboxylic acid transporter DauA low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_01908 23S rRNA (guanine(745)-N(1))-methyltransferase 0.16 OHPLBJKB_02481 C4-dicarboxylic acid transporter DauA low > 74
Escherichia coli ECRC101 0.37 MCAODC_18905 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.16 MCAODC_21835 dauA C4-dicarboxylic acid transporter DauA low > 87
Escherichia coli ECRC62 0.36 BNILDI_15805 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.16 BNILDI_18790 dauA C4-dicarboxylic acid transporter DauA low > 75
Enterobacter asburiae PDN3 0.36 EX28DRAFT_0737 Methyltransferase domain 0.16 EX28DRAFT_0825 high affinity sulphate transporter 1 low > 76
Shewanella oneidensis MR-1 0.35 SO2788 rrmA ribosomal RNA large subunit methyltransferase A (NCBI ptt file) 0.18 SO2286 sulfate permease family protein (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_10000 23S rRNA (guanine(745)-N(1))-methyltransferase 0.18 CSW01_14530 SulP family inorganic anion transporter low > 62
Shewanella sp. ANA-3 0.33 Shewana3_2570 rrmA 23S rRNA methyltransferase A (RefSeq) 0.17 Shewana3_2264 sulphate transporter (RefSeq) low > 73
Acinetobacter radioresistens SK82 0.31 MPMX26_02818 23S rRNA (guanine(745)-N(1))-methyltransferase 0.21 MPMX26_01493 putative sulfate transporter — —
Pectobacterium carotovorum WPP14 0.31 HER17_RS11350 23S rRNA (guanine(745)-N(1))-methyltransferase 0.17 HER17_RS09730 C4-dicarboxylic acid transporter DauA low > 75
Marinobacter adhaerens HP15 0.28 HP15_1754 rRNA (guanine-N1-)-methyltransferase A, predicted 0.21 HP15_3978 sulfate permease low > 73

Not shown: 19 genomes with orthologs for Psyr_1330 only; 22 genomes with orthologs for Psyr_0026 only