Conservation of cofitness between Pf1N1B4_1187 and Pf1N1B4_3549 in Pseudomonas fluorescens FW300-N1B4

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_1187 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE 1.0 Pf1N1B4_3549 YciL protein 0.26 13
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_5115 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE 1.00 PfGW456L13_4407 YciL protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_05705 oxidoreductase 0.92 AO353_18510 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_3381 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE 0.89 Pf6N2E2_5623 YciL protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_07555 oxidoreductase 0.91 AO356_18485 hypothetical protein — —
Pseudomonas sp. RS175 0.93 PFR28_00062 Lactate utilization protein A 0.89 PFR28_03321 Protein YciI low > 88
Pseudomonas stutzeri RCH2 0.85 Psest_0954 Fe-S oxidoreductase 0.86 Psest_1886 Uncharacterized protein conserved in bacteria low > 67
Marinobacter adhaerens HP15 0.72 HP15_4088 L-lactate dehydrogenase, LutA subunit (from data) 0.76 HP15_2225 YciI-like protein low > 73
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS10140 (Fe-S)-binding protein 0.25 QEN71_RS38165 YciI family protein low > 153
Azospirillum brasilense Sp245 0.52 AZOBR_RS25115 Fe-S oxidoreductase 0.27 AZOBR_RS00285 hypothetical protein low > 97
Rhodospirillum rubrum S1H 0.47 Rru_A1413 Protein of unknown function DUF224, cysteine-rich region (NCBI) 0.26 Rru_A3572 YCII-related (NCBI) low > 58
Dechlorosoma suillum PS 0.32 Dsui_1582 Fe-S oxidoreductase 0.75 Dsui_2887 hypothetical protein low > 51
Mucilaginibacter yixingensis YX-36 DSM 26809 0.28 ABZR88_RS05910 (Fe-S)-binding protein 0.30 ABZR88_RS06930 YciI family protein low > 71
Dickeya dianthicola ME23 0.27 DZA65_RS08665 (Fe-S)-binding protein 0.69 DZA65_RS10900 YciI family protein low > 75
Dickeya dianthicola 67-19 0.27 HGI48_RS08070 (Fe-S)-binding protein 0.67 HGI48_RS10425 YciI family protein low > 71
Dickeya dadantii 3937 0.27 DDA3937_RS07205 (Fe-S)-binding protein 0.70 DDA3937_RS10420 YciI family protein low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_03376 Lactate utilization protein A 0.75 OHPLBJKB_02432 Protein YciI — —
Escherichia coli ECOR27 0.26 NOLOHH_01920 ykgE Uncharacterized protein YkgE 0.75 NOLOHH_20380 yciI YciI family protein low > 75
Escherichia coli BL21 0.26 ECD_00262 cysteine-rich LutA family protein; putative electron transport chain YkgEFG component 0.76 ECD_01225 putative DGPF domain-containing enzyme low > 61
Escherichia coli ECRC98 0.26 JDDGAC_12755 ykgE Uncharacterized protein YkgE 0.75 JDDGAC_05905 yciI YciI family protein low > 86
Escherichia coli BW25113 0.26 b0306 ykgE predicted oxidoreductase (NCBI) 0.76 b1251 yciI orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC100 0.26 OKFHMN_09105 ykgE Uncharacterized protein YkgE 0.75 OKFHMN_28670 yciI YciI family protein — —
Escherichia coli ECRC99 0.26 KEDOAH_18860 ykgE Uncharacterized protein YkgE 0.75 KEDOAH_25665 yciI YciI family protein — —
Escherichia coli ECRC101 0.26 MCAODC_28330 ykgE Uncharacterized protein YkgE 0.75 MCAODC_21590 yciI YciI family protein 0.44 55
Escherichia coli ECRC102 0.26 NIAGMN_07170 ykgE Uncharacterized protein YkgE 0.75 NIAGMN_27565 yciI YciI family protein — —
Escherichia fergusonii Becca 0.26 EFB2_03734 Lactate utilization protein A 0.76 EFB2_02674 Protein YciI low > 86
Escherichia coli Nissle 1917 0.26 ECOLIN_RS02000 (Fe-S)-binding protein 0.76 ECOLIN_RS07555 YciI family protein — —
Escherichia coli ECOR38 0.26 HEPCGN_07630 ykgE Uncharacterized protein YkgE 0.75 HEPCGN_25135 yciI YciI family protein low > 87
Shewanella amazonensis SB2B 0.23 Sama_2441 hypothetical protein (RefSeq) 0.79 Sama_2138 YciI-like protein (RefSeq) 0.58 38
Shewanella sp. ANA-3 0.22 Shewana3_2906 hypothetical protein (RefSeq) 0.76 Shewana3_1504 YciI-like protein (RefSeq) 0.52 38
Shewanella loihica PV-4 0.22 Shew_3004 hypothetical protein (RefSeq) 0.78 Shew_2261 YciI-like protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.21 SO1520 conserved hypothetical protein (NCBI ptt file) 0.76 SO3036 conserved hypothetical protein (NCBI ptt file) low > 76

Not shown: 22 genomes with orthologs for Pf1N1B4_1187 only; 32 genomes with orthologs for Pf1N1B4_3549 only