| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_5353 | | conserved exported protein of unknown function | 1.0 | PP_5337 | | LysR family transcriptional regulator | 0.26 | 15 |
| Pseudomonas fluorescens GW456-L13 | 0.75 | PfGW456L13_722 | | putative membrane protein | 0.90 | PfGW456L13_743 | | Transcriptional regulator | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.74 | AO353_10065 | | hypothetical protein | 0.90 | AO353_09945 | | LysR family transcriptional regulator | low | > 101 |
| Pseudomonas sp. RS175 | 0.74 | PFR28_04524 | | hypothetical protein | 0.90 | PFR28_04497 | | HTH-type transcriptional regulator YjiE | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.73 | AO356_11985 | | hypothetical protein | 0.90 | AO356_11085 | | LysR family transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.73 | Pf6N2E2_4272 | | putative membrane protein | 0.89 | Pf6N2E2_4084 | | Transcriptional regulator | low | > 103 |
| Pseudomonas simiae WCS417 | 0.72 | PS417_28245 | | membrane protein | 0.91 | PS417_28125 | | LysR family transcriptional regulator | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.72 | Pf1N1B4_2004 | | putative membrane protein | 0.90 | Pf1N1B4_2026 | | Transcriptional regulator | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.72 | PFLU_RS29905 | | Tim44 domain-containing protein | 0.91 | PFLU_RS29810 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.72 | PFLU_RS29905 | | Tim44 domain-containing protein | 0.91 | PFLU_RS29810 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.71 | Psyr_5066 | | import inner membrane translocase, subunit Tim44 | 0.90 | Psyr_5050 | | transcriptional regulator, LysR family | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.71 | Psyr_5066 | | import inner membrane translocase, subunit Tim44 | 0.90 | Psyr_5050 | | transcriptional regulator, LysR family | — | — |
| Pseudomonas stutzeri RCH2 | 0.67 | Psest_4100 | | Uncharacterized protein conserved in bacteria | 0.80 | Psest_4073 | | Transcriptional regulator | — | — |
| Pseudomonas sp. S08-1 | 0.65 | OH686_13030 | | putative membrane protein | 0.78 | OH686_13320 | | LysR-family transcriptional regulator | low | > 80 |
| Paraburkholderia sabiae LMG 24235 | 0.25 | QEN71_RS02010 | | TIM44-like domain-containing protein | 0.33 | QEN71_RS33805 | | LysR substrate-binding domain-containing protein | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.23 | ABIE53_000772 | | putative lipid-binding transport protein (Tim44 family) | 0.32 | ABIE53_003512 | | DNA-binding transcriptional LysR family regulator | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.22 | H281DRAFT_04614 | | Predicted lipid-binding transport protein, Tim44 family | 0.32 | H281DRAFT_04272 | | transcriptional regulator, LysR family | — | — |
| Burkholderia phytofirmans PsJN | 0.20 | BPHYT_RS03170 | | membrane protein | 0.32 | BPHYT_RS16710 | | LysR family transcriptional regulator | low | > 109 |
| Cupriavidus basilensis FW507-4G11 | 0.15 | RR42_RS02405 | | membrane protein | 0.35 | RR42_RS29580 | | LysR family transcriptional regulator | low | > 128 |
| Herbaspirillum seropedicae SmR1 | 0.14 | HSERO_RS19480 | | membrane protein | 0.35 | HSERO_RS19265 | | LysR family transcriptional regulator | low | > 78 |
| Ralstonia solanacearum PSI07 | 0.13 | RPSI07_RS21765 | | membrane protein | 0.33 | RPSI07_RS21665 | | LysR family transcriptional regulator | low | > 81 |
| Ralstonia sp. UNC404CL21Col | 0.12 | ABZR87_RS07405 | | TIM44-like domain-containing protein | 0.33 | ABZR87_RS07510 | | LysR family transcriptional regulator | low | > 80 |
| Acidovorax sp. GW101-3H11 | 0.12 | Ac3H11_4795 | | putative membrane protein | 0.34 | Ac3H11_1953 | | Transcriptional regulator | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.11 | GFF1254 | | putative membrane protein | 0.35 | GFF518 | | Transcriptional regulator | low | > 90 |
| Variovorax sp. OAS795 | 0.11 | ABID97_RS07260 | | TIM44-like domain-containing protein | 0.34 | ABID97_RS05925 | | LysR substrate-binding domain-containing protein | low | > 91 |
| Variovorax sp. SCN45 | 0.10 | GFF2543 | | Uncharacterized membrane protein Bcep18194_A6058 | 0.33 | GFF4595 | | Transcriptional regulator | low | > 127 |