Conservation of cofitness between PP_0496 and PP_5337 in Pseudomonas putida KT2440

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0496 Sodium/alanine symporter 1.0 PP_5337 LysR family transcriptional regulator 0.37 6
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_11095 sodium:alanine symporter 0.90 AO356_11085 LysR family transcriptional regulator 0.73 2
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_4086 sodium/alanine transporter 0.89 Pf6N2E2_4084 Transcriptional regulator 0.55 2
Pseudomonas simiae WCS417 0.77 PS417_28135 sodium:alanine symporter 0.91 PS417_28125 LysR family transcriptional regulator — —
Pseudomonas sp. RS175 0.77 PFR28_04500 Amino-acid carrier protein AlsT 0.90 PFR28_04497 HTH-type transcriptional regulator YjiE 0.63 3
Pseudomonas fluorescens SBW25 0.76 PFLU_RS29820 alanine:cation symporter family protein 0.91 PFLU_RS29810 LysR family transcriptional regulator 0.52 67
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS29820 alanine:cation symporter family protein 0.91 PFLU_RS29810 LysR family transcriptional regulator 0.32 20
Pseudomonas sp. S08-1 0.76 OH686_13280 Probable AGCS sodium/alanine/glycine symporter 0.78 OH686_13320 LysR-family transcriptional regulator low > 80
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_5052 Sodium:alanine symporter 0.90 Psyr_5050 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_5052 Sodium:alanine symporter 0.90 Psyr_5050 transcriptional regulator, LysR family low > 86
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_09955 sodium:alanine symporter 0.90 AO353_09945 LysR family transcriptional regulator 0.60 2
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_2024 sodium/alanine transporter 0.90 Pf1N1B4_2026 Transcriptional regulator low > 87
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_741 sodium/alanine transporter 0.90 PfGW456L13_743 Transcriptional regulator 0.75 1
Pseudomonas stutzeri RCH2 0.62 Psest_4077 amino acid carrier protein 0.80 Psest_4073 Transcriptional regulator — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF1082 Putative alanine/glycine transport protein 0.30 GFF984 LysR family transcriptional regulator QseA low > 78
Sinorhizobium meliloti 1021 0.37 SMc04263 amino acid carrier transmembrane protein 0.25 SMa0097 LysR family transcriptional regulator low > 103
Klebsiella michiganensis M5al 0.35 BWI76_RS04265 sodium:alanine symporter family protein 0.28 BWI76_RS17610 LysR family transcriptional regulator low > 92
Escherichia coli BL21 0.35 ECD_00007 putative transporter 0.31 ECD_04196 hypochlorite-responsive transcription factor low > 61
Escherichia coli BW25113 0.35 b0007 yaaJ predicted transporter (NCBI) 0.31 b4327 yjiE predicted DNA-binding transcriptional regulator (NCBI) low > 76
Rahnella sp. WP5 0.35 EX31_RS03925 alanine:cation symporter family protein 0.28 EX31_RS05520 LysR family transcriptional regulator low > 89
Escherichia coli ECRC62 0.35 BNILDI_08190 yaaJ Uncharacterized transporter YaaJ 0.31 BNILDI_07735 hypT hypochlorite stress DNA-binding transcriptional regulator HypT low > 75
Escherichia coli ECOR38 0.35 HEPCGN_09090 yaaJ Uncharacterized transporter YaaJ 0.31 HEPCGN_09540 hypT hypochlorite stress DNA-binding transcriptional regulator HypT low > 87
Escherichia coli ECOR27 0.35 NOLOHH_03415 yaaJ Uncharacterized transporter YaaJ 0.31 NOLOHH_03860 hypT hypochlorite stress DNA-binding transcriptional regulator HypT low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_03653 Amino-acid carrier protein AlsT 0.31 OHPLBJKB_03739 HTH-type transcriptional regulator YjiE low > 73
Escherichia fergusonii Becca 0.35 EFB2_04036 Amino-acid carrier protein AlsT 0.31 EFB2_04117 HTH-type transcriptional regulator YjiE low > 86
Escherichia coli Nissle 1917 0.34 ECOLIN_RS00040 sodium:alanine symporter family protein 0.31 ECOLIN_RS24870 hypochlorite stress DNA-binding transcriptional regulator HypT low > 55
Phaeobacter inhibens DSM 17395 0.27 PGA1_78p00280 putative sodium/alanine symporter 0.29 PGA1_262p00990 transcriptional regulator, LysR family low > 62
Marinobacter adhaerens HP15 0.23 HP15_3907 sodium/alanine symporter family protein 0.26 HP15_205 protein containing bacterial regulatory protein, LysR domain low > 73
Dinoroseobacter shibae DFL-12 0.21 Dshi_1808 amino acid carrier protein (RefSeq) 0.24 Dshi_1440 transcriptional regulator, LysR family (RefSeq) low > 64
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS14800 amino acid carrier protein 0.33 QEN71_RS33805 LysR substrate-binding domain-containing protein low > 153

Not shown: 27 genomes with orthologs for PP_0496 only; 23 genomes with orthologs for PP_5337 only