Conservation of cofitness between PP_4999 and PP_4799 in Pseudomonas putida KT2440

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4999 dihydroorotase-like protein 1.0 PP_4799 putative Muramoyltetrapeptide carboxypeptidase 0.68 4
Pseudomonas simiae WCS417 0.85 PS417_26705 dihydroorotase 0.57 PS417_24685 peptidase S66 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_0481 dihydroorotase 0.30 Psyr_1838 Peptidase U61, LD-carboxypeptidase A — —
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_0481 dihydroorotase 0.30 Psyr_1838 Peptidase U61, LD-carboxypeptidase A — —
Pseudomonas fluorescens SBW25 0.85 PFLU_RS28350 dihydroorotase 0.58 PFLU_RS26615 LD-carboxypeptidase — —
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS28350 dihydroorotase 0.58 PFLU_RS26615 LD-carboxypeptidase — —
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_2346 Dihydroorotase (EC 3.5.2.3) 0.59 Pf1N1B4_2700 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) — —
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_1015 Dihydroorotase (EC 3.5.2.3) 0.58 PfGW456L13_1368 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) — —
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_4605 Dihydroorotase (EC 3.5.2.3) 0.60 Pf6N2E2_5006 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) — —
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_08140 dihydroorotase 0.62 AO353_06435 peptidase S66 — —
Pseudomonas sp. RS175 0.81 PFR28_04238 Dihydroorotase-like protein 0.57 PFR28_03860 putative murein peptide carboxypeptidase — —
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_13445 dihydroorotase 0.61 AO356_15350 peptidase S66 — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS12630 dihydroorotase 0.20 RALBFv3_RS00630 muramoyltetrapeptide carboxypeptidase — —
Ralstonia solanacearum UW163 0.42 UW163_RS00935 dihydroorotase 0.20 UW163_RS13960 muramoyltetrapeptide carboxypeptidase — —
Ralstonia solanacearum PSI07 0.41 RPSI07_RS20630 dihydroorotase 0.20 RPSI07_RS16875 muramoyltetrapeptide carboxypeptidase — —
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_04818 dihydroorotase 0.19 H281DRAFT_06199 muramoyltetrapeptide carboxypeptidase low > 103
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS02340 dihydroorotase 0.20 HSERO_RS11050 peptidase S66 — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF652 Dihydroorotase (EC 3.5.2.3) 0.15 GFF4699 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) — —
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS04245 dihydroorotase 0.20 BPHYT_RS11575 peptidase S66 — —
Paraburkholderia graminis OAS925 0.38 ABIE53_001133 dihydroorotase 0.20 ABIE53_002396 muramoyltetrapeptide carboxypeptidase low > 113
Variovorax sp. OAS795 0.38 ABID97_RS24655 dihydroorotase 0.16 ABID97_RS16320 LD-carboxypeptidase — —
Acidovorax sp. GW101-3H11 0.37 Ac3H11_3977 Dihydroorotase (EC 3.5.2.3) 0.17 Ac3H11_555 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) — —
Variovorax sp. SCN45 0.34 GFF2161 Dihydroorotase (EC 3.5.2.3) 0.17 GFF186 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.29 ABZR88_RS07940 dihydroorotase family protein 0.22 ABZR88_RS19815 LD-carboxypeptidase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS04255 dihydroorotase 0.12 A4249_RS10615 LD-carboxypeptidase — —
Synechococcus elongatus PCC 7942 0.17 Synpcc7942_0486 pyrC dihydroorotase 0.21 Synpcc7942_1963 hypothetical protein — —
Bacteroides ovatus ATCC 8483 0.15 BACOVA_00399 amidohydrolase family protein 0.20 BACOVA_01632 LD-carboxypeptidase — —
Bacteroides thetaiotaomicron VPI-5482 0.15 BT0250 dihydroorotase (DHOase) (NCBI ptt file) 0.22 BT2549 putative carboxypeptidase (NCBI ptt file) — —
Bacteroides stercoris CC31F 0.14 HMPREF1181_RS04650 dihydroorotase 0.21 HMPREF1181_RS00850 LD-carboxypeptidase low > 56

Not shown: 34 genomes with orthologs for PP_4999 only; 20 genomes with orthologs for PP_4799 only