Conservation of cofitness between PP_0185 and PP_4143 in Pseudomonas putida KT2440

22 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Pseudomonas putida KT2440	1.0	PP_0185		Positive alginate biosynthesis regulatory protein	1.0	PP_4143		conserved protein of unknown function	0.45	3
Pseudomonas fluorescens FW300-N2E3	0.84	AO353_08995		chemotaxis protein CheY	0.81	AO353_23495		SAM-dependent methyltransferase	low	> 101
Pseudomonas fluorescens GW456-L13	0.82	PfGW456L13_855		Autolysis response regulater LytR	0.81	PfGW456L13_3339		FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	low	> 87
Pseudomonas fluorescens FW300-N1B4	0.82	Pf1N1B4_2184		Autolysis response regulater LytR	0.81	Pf1N1B4_4597		FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	—	—
Pseudomonas syringae pv. syringae B728a	0.81	Psyr_0063		Two-component response regulator AlgR	0.77	Psyr_1762		conserved hypothetical protein	low	> 86
Pseudomonas fluorescens FW300-N2C3	0.81	AO356_12785		chemotaxis protein CheY	0.80	AO356_24485		SAM-dependent methyltransferase	low	> 104
Pseudomonas syringae pv. syringae B728a ΔmexB	0.81	Psyr_0063		Two-component response regulator AlgR	0.77	Psyr_1762		conserved hypothetical protein	low	> 86
Pseudomonas sp. RS175	0.81	PFR28_04366		Sensory transduction protein LytR	0.80	PFR28_01553		hypothetical protein	low	> 88
Pseudomonas fluorescens FW300-N2E2	0.81	Pf6N2E2_4430		Autolysis response regulater LytR	0.80	Pf6N2E2_588		FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	—	—
Pseudomonas simiae WCS417	0.79	PS417_27535		chemotaxis protein CheY	0.80	PS417_12225		SAM-dependent methyltransferase	—	—
Pseudomonas fluorescens SBW25-INTG	0.79	PFLU_RS29215		response regulator transcription factor	0.79	PFLU_RS12915		methyltransferase domain-containing protein	low	> 109
Pseudomonas fluorescens SBW25	0.79	PFLU_RS29215		response regulator transcription factor	0.79	PFLU_RS12915		methyltransferase domain-containing protein	low	> 109
Pseudomonas stutzeri RCH2	0.77	Psest_3749		Response regulator of the LytR/AlgR family	0.63	Psest_2072		Methyltransferase domain.	low	> 67
Pseudomonas sp. S08-1	0.76	OH686_13895		Alginate biosynthesis two-component system response regulator AlgR	0.64	OH686_03575		SAM-dependent methyltransferase	low	> 80
Marinobacter adhaerens HP15	0.36	HP15_241		alginate biosynthesis regulatory protein AlgR-like protein	0.18	HP15_1804		generic methyl-transferase	low	> 73
Dechlorosoma suillum PS	0.29	Dsui_0109		response regulator of the LytR/AlgR family	0.21	Dsui_2483		methylase involved in ubiquinone/menaquinone biosynthesis	—	—
Variovorax sp. OAS795	0.24	ABID97_RS08200		LytTR family DNA-binding domain-containing protein	0.19	ABID97_RS14735		methyltransferase domain-containing protein	low	> 91
Ralstonia sp. UNC404CL21Col	0.20	ABZR87_RS11570		LytTR family DNA-binding domain-containing protein	0.20	ABZR87_RS14170		class I SAM-dependent methyltransferase	—	—
Cupriavidus basilensis FW507-4G11	0.20	RR42_RS12225		LytR family transcriptional regulator	0.20	RR42_RS13575		SAM-dependent methyltransferase	—	—
Variovorax sp. SCN45	0.19	GFF3826		Response regulator receiver:LytTr DNA-binding region	0.20	GFF1117		FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	low	> 127
Herbaspirillum seropedicae SmR1	0.17	HSERO_RS18060		LytR family transcriptional regulator	0.18	HSERO_RS17115		methyltransferase type 11	—	—
Klebsiella michiganensis M5al	0.16	BWI76_RS19470		DNA-binding response regulator	0.12	BWI76_RS05445		type 11 methyltransferase	low	> 92
Pantoea sp. MT58	0.15	IAI47_05560		response regulator transcription factor	0.12	IAI47_15335		class I SAM-dependent methyltransferase	low	> 76

Not shown: 59 genomes with orthologs for PP_0185 only; 1 genomes with orthologs for PP_4143 only