| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_4129 | | NADH:ubiquinone oxidoreductase, membrane subunit L | 1.0 | PP_4121 | | NADH-quinone oxidoreductase subunit C/D | 0.81 | 1 |
| Pseudomonas sp. RS175 | 0.93 | PFR28_02637 | | NADH-quinone oxidoreductase subunit L | 0.92 | PFR28_02629 | | NADH-quinone oxidoreductase subunit C/D | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.91 | PFLU_RS18665 | | NADH-quinone oxidoreductase subunit L | 0.91 | PFLU_RS18625 | | NADH-quinone oxidoreductase subunit C/D | 0.84 | 1 |
| Pseudomonas fluorescens SBW25 | 0.91 | PFLU_RS18665 | | NADH-quinone oxidoreductase subunit L | 0.91 | PFLU_RS18625 | | NADH-quinone oxidoreductase subunit C/D | 0.83 | 3 |
| Pseudomonas simiae WCS417 | 0.91 | PS417_16625 | | NADH-quinone oxidoreductase subunit L | 0.91 | PS417_16585 | | NADH:ubiquinone oxidoreductase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.91 | AO353_27790 | | NADH-quinone oxidoreductase subunit L | 0.92 | AO353_27750 | | NADH:ubiquinone oxidoreductase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.90 | PfGW456L13_2623 | | NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) | 0.93 | PfGW456L13_2631 | | NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) | 0.62 | 1 |
| Pseudomonas fluorescens FW300-N2C3 | 0.90 | AO356_22020 | | NADH-quinone oxidoreductase subunit L | 0.93 | AO356_22060 | | NADH:ubiquinone oxidoreductase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.89 | Pf6N2E2_267 | | NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) | 0.93 | Pf6N2E2_275 | | NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.88 | Pf1N1B4_4030 | | NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) | 0.92 | Pf1N1B4_4039 | | NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) | 0.81 | 2 |
| Pseudomonas syringae pv. syringae B728a | 0.87 | Psyr_3207 | | NADH dehydrogenase subunit L | 0.95 | Psyr_3199 | | NADH dehydrogenase subunit D / NADH dehydrogenase subunit C | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.87 | Psyr_3207 | | NADH dehydrogenase subunit L | 0.95 | Psyr_3199 | | NADH dehydrogenase subunit D / NADH dehydrogenase subunit C | — | — |
| Pseudomonas sp. S08-1 | 0.76 | OH686_00105 | | NADH-ubiquinone oxidoreductase chain L | 0.91 | OH686_00145 | | NADH-ubiquinone oxidoreductase chain C / NADH-ubiquinone oxidoreductase chain D | 0.95 | 1 |
| Shewanella oneidensis MR-1 | 0.69 | SO1011 | nuoL | NADH dehydrogenase I, L subunit (NCBI ptt file) | 0.77 | SO1019 | nuoCD | NADH dehydrogenase I, C/D subunits (NCBI ptt file) | 0.92 | 4 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.67 | GFF1881 | | NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) | 0.78 | GFF1889 | | NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) | 0.94 | 7 |
| Pectobacterium carotovorum WPP14 | 0.67 | HER17_RS07175 | | NADH-quinone oxidoreductase subunit L | 0.78 | HER17_RS07135 | | NADH-quinone oxidoreductase subunit C/D | 0.76 | 11 |
| Escherichia coli ECOR27 | 0.67 | NOLOHH_14510 | nuoL | NADH-quinone oxidoreductase subunit L | 0.78 | NOLOHH_14470 | nuoC | NADH-quinone oxidoreductase subunit C/D | low | > 57 |
| Pantoea sp. MT58 | 0.67 | IAI47_06410 | | NADH-quinone oxidoreductase subunit L | 0.78 | IAI47_06370 | | NADH-quinone oxidoreductase subunit C/D | 0.92 | 5 |
| Erwinia tracheiphila SCR3 | 0.67 | LU632_RS08015 | nuoL | NADH-quinone oxidoreductase subunit L | 0.77 | LU632_RS07975 | nuoC | NADH-quinone oxidoreductase subunit C/D | 0.98 | 1 |
| Enterobacter sp. TBS_079 | 0.67 | MPMX20_03208 | | NADH-quinone oxidoreductase subunit L | 0.78 | MPMX20_03216 | | NADH-quinone oxidoreductase subunit C/D | 0.90 | 3 |
| Enterobacter asburiae PDN3 | 0.67 | EX28DRAFT_0332 | | proton-translocating NADH-quinone oxidoreductase, chain L | 0.78 | EX28DRAFT_0323 | | NADH (or F420H2) dehydrogenase, subunit C | 0.93 | 7 |
| Escherichia coli BL21 | 0.67 | ECD_02203 | | NADH:ubiquinone oxidoreductase, membrane subunit L | 0.78 | ECD_02211 | | NADH:ubiquinone oxidoreductase, fused CD subunit | 0.91 | 5 |
| Escherichia coli ECRC99 | 0.67 | KEDOAH_05305 | nuoL | NADH-quinone oxidoreductase subunit L | 0.78 | KEDOAH_05345 | nuoC | NADH-quinone oxidoreductase subunit C/D | — | — |
| Escherichia coli ECRC101 | 0.67 | OKFHMN_22890 | nuoL | NADH-quinone oxidoreductase subunit L | 0.78 | OKFHMN_22850 | nuoC | NADH-quinone oxidoreductase subunit C/D | — | — |
| Escherichia coli ECRC98 | 0.67 | JDDGAC_26855 | nuoL | NADH-quinone oxidoreductase subunit L | 0.78 | JDDGAC_26815 | nuoC | NADH-quinone oxidoreductase subunit C/D | — | — |
| Escherichia coli ECRC101 | 0.67 | MCAODC_13930 | nuoL | NADH-quinone oxidoreductase subunit L | 0.78 | MCAODC_13890 | nuoC | NADH-quinone oxidoreductase subunit C/D | — | — |
| Escherichia coli Nissle 1917 | 0.67 | ECOLIN_RS13235 | | NADH-quinone oxidoreductase subunit L | 0.78 | ECOLIN_RS13275 | | NADH-quinone oxidoreductase subunit C/D | 0.96 | 1 |
| Escherichia coli ECRC102 | 0.67 | NIAGMN_20660 | nuoL | NADH-quinone oxidoreductase subunit L | 0.78 | NIAGMN_20620 | nuoC | NADH-quinone oxidoreductase subunit C/D | — | — |
| Escherichia coli ECOR38 | 0.67 | HEPCGN_22095 | nuoL | NADH-quinone oxidoreductase subunit L | 0.78 | HEPCGN_22055 | nuoC | NADH-quinone oxidoreductase subunit C/D | 0.89 | 25 |
| Escherichia fergusonii Becca | 0.67 | EFB2_01581 | | NADH-quinone oxidoreductase subunit L | 0.78 | EFB2_01573 | | NADH-quinone oxidoreductase subunit C/D | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.67 | OHPLBJKB_01428 | | NADH-quinone oxidoreductase subunit L | 0.78 | OHPLBJKB_01420 | | NADH-quinone oxidoreductase subunit C/D | 0.57 | 4 |
| Escherichia coli ECRC62 | 0.67 | BNILDI_13430 | nuoL | NADH-quinone oxidoreductase subunit L | 0.78 | BNILDI_13390 | nuoC | NADH-quinone oxidoreductase subunit C/D | — | — |
| Rahnella sp. WP5 | 0.67 | EX31_RS19385 | | NADH-quinone oxidoreductase subunit L | 0.77 | EX31_RS19425 | | NADH-quinone oxidoreductase subunit C/D | 0.82 | 2 |
| Escherichia coli BW25113 | 0.67 | b2278 | nuoL | NADH dehydrogenase subunit L (NCBI) | 0.78 | b2286 | nuoC | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | 0.95 | 3 |
| Serratia liquefaciens MT49 | 0.66 | IAI46_17660 | | NADH-quinone oxidoreductase subunit L | 0.79 | IAI46_17700 | | NADH-quinone oxidoreductase subunit C/D | 0.47 | 20 |
| Klebsiella michiganensis M5al | 0.65 | BWI76_RS20140 | | NADH-quinone oxidoreductase subunit L | 0.78 | BWI76_RS20180 | | NADH-quinone oxidoreductase subunit C/D | 0.82 | 5 |
| Dickeya dianthicola ME23 | 0.65 | DZA65_RS14935 | | NADH-quinone oxidoreductase subunit L | 0.78 | DZA65_RS14975 | | NADH-quinone oxidoreductase subunit C/D | — | — |
| Dickeya dadantii 3937 | 0.65 | DDA3937_RS14285 | | NADH-quinone oxidoreductase subunit L | 0.78 | DDA3937_RS14325 | | NADH-quinone oxidoreductase subunit C/D | — | — |
| Dickeya dianthicola 67-19 | 0.65 | HGI48_RS14260 | | NADH-quinone oxidoreductase subunit L | 0.78 | HGI48_RS14300 | | NADH-quinone oxidoreductase subunit C/D | low | > 71 |
| Acinetobacter radioresistens SK82 | 0.53 | MPMX26_02545 | | NADH-quinone oxidoreductase subunit L | 0.68 | MPMX26_02553 | | NADH-quinone oxidoreductase subunit C/D | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.45 | CA264_04220 | | NADH-quinone oxidoreductase subunit L | 0.60 | CA264_04260 | | NADH-quinone oxidoreductase subunit C/D | low | > 74 |
| Bacteroides stercoris CC31F | 0.24 | HMPREF1181_RS09035 | | NADH-quinone oxidoreductase subunit L | 0.23 | HMPREF1181_RS09010 | | NADH-quinone oxidoreductase subunit D | 0.60 | 3 |
| Bacteroides ovatus ATCC 8483 | 0.24 | BACOVA_04855 | | proton-translocating NADH-quinone oxidoreductase, chain L | 0.24 | BACOVA_04860 | | respiratory-chain NADH dehydrogenase, 49 Kd subunit | 0.68 | 5 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.23 | BT4060 | | NADH dehydrogenase I, chain L (NCBI ptt file) | 0.24 | BT4065 | | NADH dehydrogenase I, chain D (NCBI ptt file) | 0.59 | 3 |
| Phocaeicola vulgatus CL09T03C04 | 0.23 | HMPREF1058_RS13300 | | NADH-quinone oxidoreductase subunit L | 0.24 | HMPREF1058_RS13325 | | NADH-quinone oxidoreductase subunit D | 0.57 | 4 |
| Phocaeicola dorei CL03T12C01 | 0.23 | ABI39_RS08505 | | NADH-quinone oxidoreductase subunit L | 0.23 | ABI39_RS08530 | | NADH-quinone oxidoreductase subunit D | 0.40 | 13 |
Not shown: 14 genomes with orthologs for PP_4129 only; 1 genomes with orthologs for PP_4121 only