Conservation of cofitness between PP_4897 and PP_2348 in Pseudomonas putida KT2440

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4897 N-acetylmuramoyl-L-alanine amidase 1.0 PP_2348 Sensor histidine kinase 0.28 6
Pseudomonas sp. RS175 0.81 PFR28_05118 N-acetylmuramoyl-L-alanine amidase AmiC 0.64 PFR28_02846 Adaptive-response sensory-kinase SasA low > 88
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_08670 N-acetylmuramoyl-L-alanine amidase 0.66 AO356_21285 histidine kinase low > 104
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_0569 N-acetylmuramoyl-L-alanine amidase 0.68 Psyr_3211 ATP-binding region, ATPase-like:Histidine kinase, HAMP region low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_0569 N-acetylmuramoyl-L-alanine amidase 0.68 Psyr_3211 ATP-binding region, ATPase-like:Histidine kinase, HAMP region low > 86
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_157 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 0.67 PfGW456L13_2452 Sensor protein PhoQ (EC 2.7.13.3) low > 87
Pseudomonas fluorescens SBW25-INTG 0.79 PFLU_RS02555 AMIN domain-containing protein 0.67 PFLU_RS10440 sensor histidine kinase low > 109
Pseudomonas fluorescens SBW25 0.79 PFLU_RS02555 AMIN domain-containing protein 0.67 PFLU_RS10440 sensor histidine kinase low > 109
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_1415 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 0.69 Pf1N1B4_104 Sensor protein PhoQ (EC 2.7.13.3) — —
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_3617 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 0.65 Pf6N2E2_42 Sensor protein PhoQ (EC 2.7.13.3) low > 103
Pseudomonas simiae WCS417 0.78 PS417_02475 N-acetylmuramoyl-L-alanine amidase 0.65 PS417_10275 histidine kinase low > 88
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_13130 N-acetylmuramoyl-L-alanine amidase 0.68 AO353_19780 histidine kinase low > 101
Pseudomonas stutzeri RCH2 0.70 Psest_0680 N-acetylmuramoyl-L-alanine amidase 0.51 Psest_3534 Signal transduction histidine kinase — —
Pseudomonas sp. S08-1 0.69 OH686_09485 N-acetylmuramoyl-L-alanine amidase 0.63 OH686_00060 Sensor protein low > 80
Marinobacter adhaerens HP15 0.48 HP15_2502 N-acetylmuramoyl-L-alanine amidase-like protein 0.21 HP15_2936 periplasmic sensor signal transduction histidine kinase low > 73
Shewanella oneidensis MR-1 0.38 SO0600 amiB N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) 0.28 SO0621 sensor histidine kinase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.37 Shew_0563 N-acetylmuramoyl-L-alanine amidase (RefSeq) 0.27 Shew_0582 integral membrane sensor signal transduction histidine kinase (RefSeq) — —
Shewanella amazonensis SB2B 0.37 Sama_3028 N-acetylmuramoyl-L-alanine amidase (RefSeq) 0.27 Sama_3007 sensor histidine kinase (RefSeq) — —
Shewanella sp. ANA-3 0.37 Shewana3_0594 cell wall hydrolase/autolysin (RefSeq) 0.27 Shewana3_0614 ATPase domain-containing protein (RefSeq) — —
Castellaniella sp019104865 MT123 0.32 ABCV34_RS08775 N-acetylmuramoyl-L-alanine amidase 0.19 ABCV34_RS15615 sensor histidine kinase — —
Caulobacter crescentus NA1000 Δfur 0.17 CCNA_01952 N-acetylmuramoyl-L-alanine amidase 0.19 CCNA_02853 two-component sensor histidine kinase — —
Caulobacter crescentus NA1000 0.17 CCNA_01952 N-acetylmuramoyl-L-alanine amidase 0.19 CCNA_02853 two-component sensor histidine kinase — —

Not shown: 41 genomes with orthologs for PP_4897 only; 8 genomes with orthologs for PP_2348 only