Conservation of cofitness between PP_5035 and PP_2001 in Pseudomonas putida KT2440

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5035 Histidine utilization repressor 1.0 PP_2001 O-succinylhomoserine sulfhydrylase 0.49 2
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_0366 transcriptional regulator, GntR family 0.90 Psyr_1669 O-succinylhomoserine sulfhydrylase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_0366 transcriptional regulator, GntR family 0.90 Psyr_1669 O-succinylhomoserine sulfhydrylase low > 86
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_329 Histidine utilization repressor 0.86 PfGW456L13_3934 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 0.35 55
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_12240 histidine utilization repressor 0.86 AO353_20695 O-succinylhomoserine sulfhydrylase 0.26 69
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_09640 histidine utilization repressor 0.86 AO356_21470 O-succinylhomoserine sulfhydrylase 0.41 32
Pseudomonas sp. RS175 0.87 PFR28_04963 HTH-type transcriptional repressor NagR 0.87 PFR28_02810 O-succinylhomoserine sulfhydrylase low > 88
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_3807 Histidine utilization repressor 0.86 Pf6N2E2_77 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) low > 103
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS01765 histidine utilization repressor 0.87 PFLU_RS20510 O-succinylhomoserine sulfhydrylase 0.29 74
Pseudomonas fluorescens SBW25 0.84 PFLU_RS01765 histidine utilization repressor 0.87 PFLU_RS20510 O-succinylhomoserine sulfhydrylase low > 109
Pseudomonas simiae WCS417 0.84 PS417_01710 histidine utilization repressor 0.88 PS417_18530 O-succinylhomoserine sulfhydrylase 0.54 18
Rhizobium sp. OAE497 0.57 ABIE40_RS23900 histidine utilization repressor 0.42 ABIE40_RS02340 O-succinylhomoserine sulfhydrylase low > 107
Sinorhizobium meliloti 1021 0.57 SMc00674 histidine utilization repressor transcription regulator protein 0.42 SMc02217 O-succinylhomoserine sulfhydrylase 0.27 40
Variovorax sp. SCN45 0.47 GFF6410 Histidine utilization repressor 0.53 GFF3088 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) — —
Variovorax sp. OAS795 0.47 ABID97_RS03415 histidine utilization repressor 0.54 ABID97_RS21630 O-succinylhomoserine sulfhydrylase — —
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS16925 histidine utilization repressor 0.53 RR42_RS14320 O-succinylhomoserine sulfhydrylase low > 128
Azospirillum sp. SherDot2 0.45 MPMX19_04937 Mannosyl-D-glycerate transport/metabolism system repressor MngR 0.41 MPMX19_01364 O-succinylhomoserine sulfhydrylase low > 112
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS07755 histidine utilization repressor 0.52 QEN71_RS17685 O-succinylhomoserine sulfhydrylase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_05296 GntR family transcriptional regulator, histidine utilization repressor 0.52 H281DRAFT_06059 O-succinylhomoserine sulfhydrylase low > 103
Rhodospirillum rubrum S1H 0.44 Rru_A1294 Transcriptional Regulator, Histidine utilization repressor, GntR family (NCBI) 0.42 Rru_A3214 O-succinylhomoserine sulfhydrylase (NCBI) low > 58
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS07560 histidine utilization repressor 0.52 BPHYT_RS33835 O-succinylhomoserine sulfhydrylase — —
Paraburkholderia graminis OAS925 0.43 ABIE53_001730 GntR family histidine utilization transcriptional repressor 0.53 ABIE53_004817 O-succinylhomoserine sulfhydrylase low > 113
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF3591 Histidine utilization repressor 0.52 GFF301 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) low > 90
Pseudomonas sp. S08-1 0.41 OH686_16760 histidine utilization repressor 0.81 OH686_04415 O-succinylhomoserine sulfhydrylase low > 80
Bosea sp. OAE506 0.34 ABIE41_RS23630 histidine utilization repressor 0.43 ABIE41_RS03970 O-succinylhomoserine sulfhydrylase low > 77
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_01013 histidine utilization repressor 0.43 CCNA_02321 O-succinylhomoserine sulfhydrylase low > 67
Caulobacter crescentus NA1000 0.29 CCNA_01013 histidine utilization repressor 0.43 CCNA_02321 O-succinylhomoserine sulfhydrylase low > 66
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_3966 Transcriptional regulators 0.41 Ga0059261_3194 O-acetylhomoserine sulfhydrylase (EC:2.5.1.49) (from data) low > 68
Phaeobacter inhibens DSM 17395 0.18 PGA1_c36370 HTH-type transcriptional regulator, GntR family 0.42 PGA1_c23540 O-succinylhomoserine sulfhydrylase MetZ low > 62

Not shown: 26 genomes with orthologs for PP_5035 only; 13 genomes with orthologs for PP_2001 only