Conservation of cofitness between PP_5317 and PP_1000 in Pseudomonas putida KT2440

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5317 Probable chorismate pyruvate-lyase 1.0 PP_1000 ornithine carbamoyltransferase, catabolic 0.15 14
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_09840 chorismate--pyruvate lyase 0.86 AO353_03475 ornithine carbamoyltransferase low > 101
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_4063 Chorismate--pyruvate lyase (EC 4.1.3.40) 0.87 Pf6N2E2_2909 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 103
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_10985 chorismate--pyruvate lyase 0.87 AO356_05275 ornithine carbamoyltransferase low > 104
Pseudomonas sp. RS175 0.61 PFR28_04476 Chorismate pyruvate-lyase 0.87 PFR28_02179 Ornithine carbamoyltransferase, catabolic low > 88
Pseudomonas simiae WCS417 0.60 PS417_28020 chorismate--pyruvate lyase 0.87 PS417_22335 ornithine carbamoyltransferase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_5030 chorismate lyase 0.85 Psyr_2685 ornithine carbamoyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_5030 chorismate lyase 0.85 Psyr_2685 ornithine carbamoyltransferase low > 86
Pseudomonas fluorescens SBW25 0.60 PFLU_RS29710 chorismate lyase 0.87 PFLU_RS23975 ornithine carbamoyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS29710 chorismate lyase 0.87 PFLU_RS23975 ornithine carbamoyltransferase low > 109
Pseudomonas sp. S08-1 0.54 OH686_13475 Chorismate--pyruvate lyase 0.91 OH686_14335 ornithine carbamoyltransferase low > 80
Pseudomonas stutzeri RCH2 0.53 Psest_3843 4-hydroxybenzoate synthetase (chorismate lyase) 0.87 Psest_0271 ornithine carbamoyltransferase low > 67
Shewanella amazonensis SB2B 0.26 Sama_3623 putative chorismate--pyruvate lyase (RefSeq) 0.27 Sama_0258 ornithine carbamoyltransferase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.25 MIT1002_00068 Chorismate--pyruvate lyase 0.25 MIT1002_00469 Ornithine carbamoyltransferase 0.67 55
Marinobacter adhaerens HP15 0.22 HP15_3352 chorismate-pyruvate lyase 0.67 HP15_3987 ornithine carbamoyltransferase low > 73
Shewanella sp. ANA-3 0.21 Shewana3_0125 chorismate lyase (RefSeq) 0.28 Shewana3_3903 ornithine carbamoyltransferase (RefSeq) low > 73
Pantoea sp. MT58 0.21 IAI47_17910 chorismate lyase 0.66 IAI47_16845 ornithine carbamoyltransferase low > 76
Escherichia coli BW25113 0.20 b4039 ubiC chorismate lyase (VIMSS) 0.60 b0273 argF CP4-6 prophage; ornithine carbamoyltransferase 2, chain F (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_04004 Chorismate pyruvate-lyase 0.60 OHPLBJKB_03782 Ornithine carbamoyltransferase subunit I low > 73
Escherichia coli ECOR27 0.20 NOLOHH_05240 ubiC chorismate lyase 0.60 NOLOHH_04090 argF ornithine carbamoyltransferase low > 57
Escherichia coli ECOR38 0.20 HEPCGN_11605 ubiC chorismate lyase 0.64 HEPCGN_10045 argF ornithine carbamoyltransferase low > 85
Escherichia coli BL21 0.20 ECD_03911 chorismate--pyruvate lyase 0.60 ECD_04120 ornithine carbamoyltransferase 1 low > 60
Escherichia coli ECRC101 0.20 OKFHMN_13085 ubiC chorismate lyase 0.60 OKFHMN_11835 argF ornithine carbamoyltransferase — —
Escherichia coli ECRC102 0.20 NIAGMN_10835 ubiC chorismate lyase 0.60 NIAGMN_09685 argF ornithine carbamoyltransferase — —
Escherichia coli ECRC101 0.20 MCAODC_03585 ubiC chorismate lyase 0.60 MCAODC_02340 argF ornithine carbamoyltransferase — —
Escherichia coli ECRC98 0.20 JDDGAC_16710 ubiC chorismate lyase 0.60 JDDGAC_15475 argF ornithine carbamoyltransferase — —
Escherichia coli ECRC99 0.20 KEDOAH_15075 ubiC chorismate lyase 0.60 KEDOAH_16320 argF ornithine carbamoyltransferase — —
Klebsiella michiganensis M5al 0.20 BWI76_RS01855 chorismate lyase 0.60 BWI76_RS03010 ornithine carbamoyltransferase 0.23 36
Dickeya dianthicola ME23 0.20 DZA65_RS02870 chorismate lyase 0.65 DZA65_RS02035 ornithine carbamoyltransferase low > 75
Dickeya dianthicola 67-19 0.20 HGI48_RS02715 chorismate lyase 0.61 HGI48_RS01915 ornithine carbamoyltransferase low > 71
Escherichia coli Nissle 1917 0.20 ECOLIN_RS23315 chorismate lyase 0.64 ECOLIN_RS24645 ornithine carbamoyltransferase low > 52
Escherichia coli ECRC62 0.20 BNILDI_06280 ubiC chorismate lyase 0.60 BNILDI_07425 argF ornithine carbamoyltransferase — —
Escherichia fergusonii Becca 0.20 EFB2_04564 Chorismate pyruvate-lyase 0.64 EFB2_04285 Ornithine carbamoyltransferase low > 86
Enterobacter sp. TBS_079 0.19 MPMX20_00255 Chorismate pyruvate-lyase 0.67 MPMX20_00547 Ornithine carbamoyltransferase low > 85
Rahnella sp. WP5 0.19 EX31_RS11825 chorismate lyase 0.63 EX31_RS12800 ornithine carbamoyltransferase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF1408 Chorismate--pyruvate lyase (EC 4.1.3.40) 0.65 GFF934 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 78
Erwinia tracheiphila SCR3 0.16 LU632_RS22335 ubiC chorismate lyase 0.60 LU632_RS20900 argF ornithine carbamoyltransferase low > 74

Not shown: 3 genomes with orthologs for PP_5317 only; 15 genomes with orthologs for PP_1000 only