Conservation of cofitness between PP_4782 and PP_0612 in Pseudomonas putida KT2440

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4782 Phosphomethylpyrimidine kinase 1.0 PP_0612 FAD-dependent glycine/D-amino acid oxidase 0.54 18
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS26530 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.78 PFLU_RS03855 glycine oxidase ThiO 0.50 8
Pseudomonas fluorescens SBW25 0.88 PFLU_RS26530 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.78 PFLU_RS03855 glycine oxidase ThiO low > 109
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_15435 hydrogenase 0.77 AO356_15895 D-amino acid oxidase low > 104
Pseudomonas simiae WCS417 0.87 PS417_24600 hydrogenase 0.78 PS417_03805 D-amino acid oxidase low > 88
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_06350 hydrogenase 0.79 AO353_14195 D-amino acid oxidase 0.66 2
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_1385 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.80 PfGW456L13_1488 Glycine oxidase ThiO (EC 1.4.3.19) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_4340 phosphomethylpyrimidine kinase, putative 0.76 Psyr_0721 glycine oxidase low > 86
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_4340 phosphomethylpyrimidine kinase, putative 0.76 Psyr_0721 glycine oxidase low > 86
Pseudomonas sp. RS175 0.84 PFR28_03843 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.76 PFR28_03753 Glycine oxidase 0.38 38
Pseudomonas sp. S08-1 0.82 OH686_09185 Hydroxymethylpyrimidine phosphate kinase ThiD 0.66 OH686_16385 Glycine oxidase ThiO low > 80
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_2718 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.80 Pf1N1B4_2817 Glycine oxidase ThiO (EC 1.4.3.19) low > 87
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_5024 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.77 Pf6N2E2_5120 Glycine oxidase ThiO (EC 1.4.3.19) low > 103
Pseudomonas stutzeri RCH2 0.78 Psest_0537 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.71 Psest_3368 glycine oxidase ThiO low > 67
Acinetobacter radioresistens SK82 0.38 MPMX26_02438 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.42 MPMX26_02399 Glycine oxidase — —
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS02135 phosphomethylpyrimidine kinase 0.13 HSERO_RS05695 D-amino acid oxidase low > 78
Agrobacterium fabrum C58 0.25 Atu3290 phosphomethylpyrimidine kinase 0.13 Atu3414 AgaE protein low > 89
Ralstonia sp. UNC404CL21Col 0.24 ABZR87_RS04830 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.13 ABZR87_RS21570 FAD-binding oxidoreductase — —
Azospirillum brasilense Sp245 0.23 AZOBR_RS07045 phosphomethylpyrimidine kinase 0.22 AZOBR_RS30970 glycine oxidase — —
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_04811 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.13 H281DRAFT_06514 Glycine/D-amino acid oxidase (deaminating) low > 103
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1063 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.13 Ac3H11_4171 D-amino-acid oxidase (EC 1.4.3.3) — —
Azospirillum sp. SherDot2 0.21 MPMX19_06182 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.20 MPMX19_00260 Hydrogen cyanide synthase subunit HcnC — —
Variovorax sp. OAS795 0.19 ABID97_RS15330 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.16 ABID97_RS28570 FAD-binding oxidoreductase — —
Mycobacterium tuberculosis H37Rv 0.18 Rv0422c Probable phosphomethylpyrimidine kinase ThiD (HMP-phosphate kinase) (HMP-P kinase) 0.10 Rv0415 Possible thiamine biosynthesis oxidoreductase ThiO — —
Synechococcus elongatus PCC 7942 0.17 Synpcc7942_2379 thiD phosphomethylpyrimidine kinase 0.18 Synpcc7942_2406 thiO FAD dependent oxidoreductase — —
Variovorax sp. SCN45 0.16 GFF2149 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.12 GFF7148 D-amino-acid oxidase (EC 1.4.3.3) low > 127

Not shown: 68 genomes with orthologs for PP_4782 only; 0 genomes with orthologs for PP_0612 only