Conservation of cofitness between PP_5146 and PP_0540 in Pseudomonas putida KT2440

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5146 RNA pyrophosphohydrolase 1.0 PP_0540 conserved inner membrane protein 0.43 8
Pseudomonas fluorescens SBW25 0.99 PFLU_RS28650 RNA pyrophosphohydrolase 0.79 PFLU_RS26770 DedA family protein 0.91 3
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS28650 RNA pyrophosphohydrolase 0.79 PFLU_RS26770 DedA family protein 0.53 7
Pseudomonas simiae WCS417 0.99 PS417_26990 RNA pyrophosphohydrolase 0.79 PS417_24835 hypothetical protein low > 88
Pseudomonas sp. RS175 0.98 PFR28_04831 RNA pyrophosphohydrolase 0.77 PFR28_03891 Protein DedA low > 88
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_952 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) 0.77 PfGW456L13_1337 DedA protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_10345 RNA pyrophosphohydrolase 0.76 AO356_15200 hypothetical protein low > 104
Pseudomonas syringae pv. syringae B728a 0.98 Psyr_4843 NUDIX hydrolase 0.72 Psyr_0626 DedA low > 86
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_08470 RNA pyrophosphohydrolase 0.78 AO353_06585 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_2283 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) 0.63 Pf1N1B4_2668 DedA protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_3941 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) 0.77 Pf6N2E2_4974 DedA protein low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.98 Psyr_4843 NUDIX hydrolase 0.72 Psyr_0626 DedA low > 86
Pseudomonas sp. S08-1 0.92 OH686_11425 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase 0.55 OH686_14535 DedA protein low > 80
Acinetobacter radioresistens SK82 0.71 MPMX26_00342 RNA pyrophosphohydrolase 0.52 MPMX26_00073 Protein DedA low > 36
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_00900 RNA pyrophosphohydrolase 0.57 OHPLBJKB_01388 Protein DedA — —
Escherichia fergusonii Becca 0.70 EFB2_01054 RNA pyrophosphohydrolase 0.58 EFB2_01541 Protein DedA — —
Escherichia coli Nissle 1917 0.70 ECOLIN_RS15880 RNA pyrophosphohydrolase 0.58 ECOLIN_RS13430 DedA family protein — —
Escherichia coli BL21 0.70 ECD_02678 RNA pyrophosphohydrolase 0.57 ECD_02242 DedA family inner membrane protein — —
Enterobacter asburiae PDN3 0.70 EX28DRAFT_2905 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.58 EX28DRAFT_0287 Uncharacterized membrane-associated protein — —
Escherichia coli BW25113 0.70 b2830 nudH dinucleoside polyphosphate hydrolase (NCBI) 0.57 b2317 dedA conserved inner membrane protein (NCBI) low > 76
Dickeya dianthicola ME23 0.70 DZA65_RS05295 RNA pyrophosphohydrolase 0.55 DZA65_RS15365 DedA family protein low > 75
Escherichia coli ECRC98 0.69 JDDGAC_23665 rppH RNA pyrophosphohydrolase 0.57 JDDGAC_26635 Protein DedA — —
Escherichia coli ECRC99 0.69 KEDOAH_08130 rppH RNA pyrophosphohydrolase 0.57 KEDOAH_05520 Protein DedA — —
Escherichia coli ECRC101 0.69 MCAODC_10525 rppH RNA pyrophosphohydrolase 0.57 MCAODC_13715 Protein DedA — —
Dickeya dianthicola 67-19 0.69 HGI48_RS04955 RNA pyrophosphohydrolase 0.56 HGI48_RS14430 DedA family protein — —
Escherichia coli ECRC102 0.69 NIAGMN_17770 rppH RNA pyrophosphohydrolase 0.57 NIAGMN_20450 Protein DedA — —
Escherichia coli ECRC62 0.69 BNILDI_10365 rppH RNA pyrophosphohydrolase 0.57 BNILDI_13230 DedA family inner membrane protein — —
Escherichia coli ECOR38 0.69 HEPCGN_19255 rppH RNA pyrophosphohydrolase 0.57 HEPCGN_21880 DedA family inner membrane protein — —
Escherichia coli ECRC101 0.69 OKFHMN_20000 rppH RNA pyrophosphohydrolase 0.57 OKFHMN_22675 Protein DedA — —
Escherichia coli ECOR27 0.69 NOLOHH_11885 rppH RNA pyrophosphohydrolase 0.57 NOLOHH_14310 Protein DedA — —
Dickeya dadantii 3937 0.69 DDA3937_RS04945 RNA pyrophosphohydrolase 0.57 DDA3937_RS14460 DedA family protein low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF1312 'Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)' transl_table=11 0.58 GFF1933 DedA protein low > 78
Erwinia tracheiphila SCR3 0.69 LU632_RS06105 rppH RNA pyrophosphohydrolase 0.58 LU632_RS07830 DedA family protein — —
Pantoea sp. MT58 0.69 IAI47_03915 RNA pyrophosphohydrolase 0.55 IAI47_06250 DedA family protein low > 76
Klebsiella michiganensis M5al 0.69 BWI76_RS23275 RNA pyrophosphohydrolase 0.57 BWI76_RS20375 membrane protein — —
Serratia liquefaciens MT49 0.69 IAI46_20455 RNA pyrophosphohydrolase 0.56 IAI46_17835 DedA family protein low > 86
Rahnella sp. WP5 0.68 EX31_RS13205 RNA pyrophosphohydrolase 0.57 EX31_RS19595 DedA family protein — —
Enterobacter sp. TBS_079 0.60 MPMX20_03693 RNA pyrophosphohydrolase 0.58 MPMX20_03252 Protein DedA — —
Castellaniella sp019104865 MT123 0.53 ABCV34_RS09820 RNA pyrophosphohydrolase 0.49 ABCV34_RS08780 VTT domain-containing protein low > 48
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS01825 RNA pyrophosphohydrolase 0.52 HSERO_RS17220 membrane protein low > 78
Dechlorosoma suillum PS 0.51 Dsui_1325 ADP-ribose pyrophosphatase 0.49 Dsui_1547 putative membrane-associated protein — —

Not shown: 26 genomes with orthologs for PP_5146 only; 23 genomes with orthologs for PP_0540 only