Conservation of cofitness between PP_3748 and PP_0358 in Pseudomonas putida KT2440

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3748 conserved hypothetical protein 1.0 PP_0358 conserved membrane protein of unknown function 0.15 8
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_3334 Protein of unknown function DUF336 0.77 Psyr_4698 RarD protein low > 86
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_3334 Protein of unknown function DUF336 0.77 Psyr_4698 RarD protein
Pseudomonas stutzeri RCH2 0.69 Psest_3838 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 0.68 Psest_0356 rarD protein low > 67
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS02510 heme-binding protein 0.39 RALBFv3_RS12170 EamA family transporter RarD low > 76
Ralstonia solanacearum GMI1000 0.65 RS_RS09890 heme-binding protein 0.41 RS_RS02855 EamA family transporter RarD low > 80
Ralstonia solanacearum PSI07 0.65 RPSI07_RS14805 heme-binding protein 0.36 RPSI07_RS21160 EamA family transporter RarD low > 81
Ralstonia solanacearum UW163 0.65 UW163_RS11215 heme-binding protein 0.39 UW163_RS01440 EamA family transporter RarD
Escherichia coli BL21 0.62 ECD_02845 DUF336 family protein 0.47 ECD_03698 putative chloramphenical resistance permease low > 61
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS31825 heme-binding protein 0.39 QEN71_RS26035 EamA family transporter RarD low > 153
Escherichia coli BW25113 0.62 b2977 glcG hypothetical protein (NCBI) 0.47 b3819 rarD predicted chloramphenical resistance permease (NCBI) 0.14 76
Escherichia coli Nissle 1917 0.62 ECOLIN_RS17125 GlcG family protein 0.47 ECOLIN_RS21920 EamA family transporter RarD low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_00730 hypothetical protein 0.47 OHPLBJKB_04232 Protein RarD low > 73
Escherichia fergusonii Becca 0.62 EFB2_00838 hypothetical protein 0.47 EFB2_04818 Protein RarD 0.46 50
Escherichia coli ECOR38 0.62 HEPCGN_18010 glcF glycolate oxidase subunit GlcF 0.47 HEPCGN_13075 rarD EamA family transporter RarD low > 87
Escherichia coli ECRC62 0.62 BNILDI_00580 glcF glycolate oxidase subunit GlcF 0.47 BNILDI_05025 rarD EamA family transporter RarD low > 75
Escherichia coli ECOR27 0.62 NOLOHH_10935 glcF glycolate oxidase subunit GlcF 0.47 NOLOHH_06505 rarD EamA family transporter RarD low > 75
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS14420 heme-binding protein 0.46 ABZR87_RS08060 EamA family transporter RarD low > 80
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_26130 hypothetical protein 0.86 AO356_14110 Putative D-serine transporter (from data)
Pseudomonas sp. RS175 0.57 PFR28_01843 hypothetical protein 0.88 PFR28_04108 Protein RarD low > 88
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_1099 Hypothetical protein GlcG in glycolate utilization operon 0.88 Pf6N2E2_4754 Protein rarD low > 103
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS13940 hypothetical protein 0.39 RR42_RS20410 transporter low > 128
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS06915 hypothetical protein 0.37 HSERO_RS23555 membrane protein low > 78
Acidovorax sp. GW101-3H11 0.53 Ac3H11_2844 Protein GlcG 0.40 Ac3H11_4000 RarD protein, DMT superfamily transporter low > 79
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_4114 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 0.36 Ga0059261_3478 rarD protein
Marinobacter adhaerens HP15 0.23 HP15_3025 glcG protein 0.37 HP15_2670 RarD protein, DMT superfamily transporter low > 73
Shewanella sp. ANA-3 0.21 Shewana3_1276 hypothetical protein (RefSeq) 0.45 Shewana3_3765 transporter DMT superfamily protein (RefSeq) low > 73

Not shown: 8 genomes with orthologs for PP_3748 only; 47 genomes with orthologs for PP_0358 only