Conservation of cofitness between PFLU_RS29215 and PFLU_RS24650 in Pseudomonas fluorescens SBW25

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS29215 response regulator transcription factor 1.0 PFLU_RS24650 SIS domain-containing protein 0.95 5
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS29215 response regulator transcription factor 1.00 PFLU_RS24650 SIS domain-containing protein 0.48 1
Pseudomonas simiae WCS417 0.99 PS417_27535 chemotaxis protein CheY 0.97 PS417_22990 iron dicitrate transport regulator FecR low > 88
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_08995 chemotaxis protein CheY 0.86 AO353_04455 Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) (from data) low > 101
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_855 Autolysis response regulater LytR 0.88 PfGW456L13_4831 Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) (from data) 0.30 58
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_12785 chemotaxis protein CheY 0.86 AO356_17545 iron dicitrate transport regulator FecR low > 104
Pseudomonas sp. RS175 0.86 PFR28_04366 Sensory transduction protein LytR 0.84 PFR28_03513 hypothetical protein low > 88
Lysobacter sp. OAE881 0.39 ABIE51_RS02955 LytTR family DNA-binding domain-containing protein 0.41 ABIE51_RS01630 SIS domain-containing protein low > 62
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.830.1 Autolysis response regulater LytR 0.41 Xcc-8004.956.1 Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) low > 74
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_14425 lytT DNA-binding response regulator 0.39 OKGIIK_14350 agaS iron dicitrate transport regulator FecR low > 52
Rhodanobacter denitrificans MT42 0.27 LRK55_RS07675 LytTR family DNA-binding domain-containing protein 0.39 LRK55_RS07590 SIS domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS07945 LytTR family DNA-binding domain-containing protein 0.39 LRK54_RS07860 SIS domain-containing protein low > 59
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS14825 LytTR family DNA-binding domain-containing protein 0.41 ABZR86_RS16050 SIS domain-containing protein low > 74
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_0044 two component transcriptional regulator, LytTR family 0.41 Ga0059261_1644 Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) (from data) low > 68
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS18060 LytR family transcriptional regulator 0.54 HSERO_RS22765 iron dicitrate transport regulator FecR low > 78
Shewanella sp. ANA-3 0.19 Shewana3_2594 putative two-component response-regulatory protein YehT (RefSeq) 0.31 Shewana3_3113 Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) (from data) low > 73
Shewanella oneidensis MR-1 0.18 SO2823 response regulator (NCBI ptt file) 0.31 SO3506 Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) (from data) low > 76
Shewanella amazonensis SB2B 0.15 Sama_1281 putative two-component response-regulatory protein YehT (RefSeq) 0.30 Sama_0945 Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) (from data) low > 62
Azospirillum sp. SherDot2 0.15 MPMX19_06239 Transcriptional regulatory protein BtsR 0.34 MPMX19_03614 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] low > 112
Azospirillum brasilense Sp245 0.15 AZOBR_RS22560 transcriptional regulator 0.37 AZOBR_RS25530 sugar aminotransferase — —

Not shown: 62 genomes with orthologs for PFLU_RS29215 only; 10 genomes with orthologs for PFLU_RS24650 only