Conservation of cofitness between PFLU_RS29215 and PFLU_RS18165 in Pseudomonas fluorescens SBW25

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS29215 response regulator transcription factor 1.0 PFLU_RS18165 transketolase 0.90 18
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS29215 response regulator transcription factor 1.00 PFLU_RS18165 transketolase 0.47 3
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_08995 chemotaxis protein CheY 0.32 AO353_24510 transketolase low > 101
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_4430 Autolysis response regulater LytR 0.30 Pf6N2E2_1741 Transketolase, N-terminal section (EC 2.2.1.1) low > 103
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_12785 chemotaxis protein CheY 0.32 AO356_27325 transketolase low > 104
Pseudomonas sp. RS175 0.86 PFR28_04366 Sensory transduction protein LytR 0.31 PFR28_01927 Apulose-4-phosphate transketolase subunit A low > 88
Acidovorax sp. GW101-3H11 0.26 Ac3H11_1634 Response regulator receiver:LytTr DNA-binding region 0.29 Ac3H11_2070 Transketolase, N-terminal section (EC 2.2.1.1) low > 79
Variovorax sp. OAS795 0.25 ABID97_RS08200 LytTR family DNA-binding domain-containing protein 0.31 ABID97_RS11190 transketolase low > 91
Mucilaginibacter yixingensis YX-36 DSM 26809 0.22 ABZR88_RS18055 LytTR family DNA-binding domain-containing protein 0.44 ABZR88_RS15205 transketolase low > 71
Variovorax sp. SCN45 0.22 GFF3826 Response regulator receiver:LytTr DNA-binding region 0.31 GFF4635 Transketolase, N-terminal section (EC 2.2.1.1) low > 127
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_0044 two component transcriptional regulator, LytTR family 0.40 Ga0059261_2625 Transketolase, N-terminal subunit low > 68
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS18060 LytR family transcriptional regulator 0.29 HSERO_RS05550 transketolase low > 78
Cupriavidus basilensis FW507-4G11 0.20 RR42_RS12225 LytR family transcriptional regulator 0.28 RR42_RS33720 transketolase low > 128
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_1140 Response regulator of the LytR/AlgR family 0.46 Echvi_1286 Transketolase, N-terminal subunit low > 79
Dickeya dadantii 3937 0.19 DDA3937_RS16365 two-component system response regulator BtsR 0.46 DDA3937_RS02160 transketolase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS10975 DNA-binding response regulator 0.31 CA265_RS15180 transketolase
Pontibacter actiniarum KMM 6156, DSM 19842 0.18 CA264_13010 DNA-binding response regulator 0.34 CA264_11950 transketolase
Dickeya dianthicola 67-19 0.18 HGI48_RS16465 two-component system response regulator BtsR 0.46 HGI48_RS02115 transketolase
Dickeya dianthicola ME23 0.18 DZA65_RS17550 two-component system response regulator BtsR 0.46 DZA65_RS02245 transketolase low > 75
Enterobacter sp. TBS_079 0.17 MPMX20_03092 Transcriptional regulatory protein BtsR 0.30 MPMX20_03229 Apulose-4-phosphate transketolase subunit A low > 85
Rahnella sp. WP5 0.17 EX31_RS00780 two-component system response regulator BtsR 0.30 EX31_RS19495 transketolase low > 89
Enterobacter asburiae PDN3 0.16 EX28DRAFT_0437 two component transcriptional regulator, LytTR family 0.31 EX28DRAFT_0310 Transketolase, N-terminal subunit low > 76
Pectobacterium carotovorum WPP14 0.16 HER17_RS05370 two-component system response regulator BtsR 0.68 HER17_RS09355 transketolase low > 75
Escherichia coli ECOR38 0.16 HEPCGN_02640 btsR two-component system response regulator BtsR 0.30 HEPCGN_10925 transketolase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF3820 Two-component response-regulatory protein YehT 0.29 GFF1904 Transketolase, N-terminal section (EC 2.2.1.1) low > 78
Klebsiella michiganensis M5al 0.16 BWI76_RS19470 DNA-binding response regulator 0.70 BWI76_RS07680 transketolase low > 92
Pantoea sp. MT58 0.15 IAI47_05560 response regulator transcription factor 0.65 IAI47_11795 transketolase low > 76
Fusobacterium nucleatum SB010 0.14 HUW76_02600 response regulator transcription factor 0.41 HUW76_02760 transketolase
Phocaeicola vulgatus CL09T03C04 0.14 HMPREF1058_RS18080 response regulator transcription factor 0.40 HMPREF1058_RS02710 transketolase low > 67
Phocaeicola dorei CL03T12C01 0.14 ABI39_RS14405 response regulator transcription factor 0.40 ABI39_RS01990 transketolase low > 72

Not shown: 52 genomes with orthologs for PFLU_RS29215 only; 10 genomes with orthologs for PFLU_RS18165 only