Conservation of cofitness between PFLU_RS07240 and PFLU_RS13405 in Pseudomonas fluorescens SBW25

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS07240 sigma factor AlgU regulatory protein MucB 1.0 PFLU_RS13405 sugar ABC transporter substrate-binding protein 0.65 3
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS07240 sigma factor AlgU regulatory protein MucB 1.00 PFLU_RS13405 sugar ABC transporter substrate-binding protein low > 109
Pseudomonas simiae WCS417 0.92 PS417_07130 RNA polymerase sigma-H factor AlgU 0.96 PS417_12715 ABC transporter for D-Mannitol and D-Sorbitol, periplasmic substrate-binding protein (from data) low > 88
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_17635 RNA polymerase subunit sigma 0.88 AO353_25880 sugar ABC transporter substrate-binding protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_3325 Sigma factor RpoE negative regulatory protein RseB precursor 0.89 Pf1N1B4_4850 Various polyols ABC transporter, periplasmic substrate-binding protein low > 87
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_4514 Sigma factor RpoE negative regulatory protein RseB precursor 0.87 PfGW456L13_3042 Various polyols ABC transporter, periplasmic substrate-binding protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_04565 RNA polymerase subunit sigma 0.94 AO356_27670 sugar ABC transporter substrate-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_2754 Sigma factor RpoE negative regulatory protein RseB precursor 0.94 Pf6N2E2_810 Various polyols ABC transporter, periplasmic substrate-binding protein low > 103
Pseudomonas sp. RS175 0.70 PFR28_00692 Sigma factor AlgU regulatory protein MucB 0.93 PFR28_01713 hypothetical protein low > 88
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_3956 sigma E regulatory protein, MucB/RseB 0.80 Psyr_2440 mannitol-binding protein / sorbitol-binding protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_3956 sigma E regulatory protein, MucB/RseB 0.80 Psyr_2440 mannitol-binding protein / sorbitol-binding protein low > 86
Burkholderia phytofirmans PsJN 0.17 BPHYT_RS14395 sugar dehydratase 0.61 BPHYT_RS16115 ABC transporter for D-Sorbitol, periplasmic substrate-binding component (from data) low > 109
Paraburkholderia bryophila 376MFSha3.1 0.16 H281DRAFT_04357 sigma E regulatory protein, MucB/RseB 0.61 H281DRAFT_04159 sorbitol-binding protein /mannitol-binding protein low > 103
Paraburkholderia graminis OAS925 0.16 ABIE53_003041 sigma-E factor negative regulatory protein RseB 0.61 ABIE53_003396 sorbitol/mannitol transport system substrate-binding protein low > 113
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS04585 MucB/RseB C-terminal domain-containing protein 0.60 QEN71_RS02590 sugar ABC transporter substrate-binding protein low > 153
Pantoea sp. MT58 0.15 IAI47_04860 sigma-E factor regulatory protein RseB 0.09 IAI47_20100 extracellular solute-binding protein low > 76
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS09635 transcriptional regulator 0.57 HSERO_RS02190 sugar ABC transporter substrate-binding protein low > 78
Acidovorax sp. GW101-3H11 0.13 Ac3H11_1571 Sigma factor RpoE negative regulatory protein RseB precursor 0.56 Ac3H11_2944 ABC transporter for D-Sorbitol, periplasmic substrate-binding component (from data)
Ralstonia solanacearum GMI1000 0.13 RS_RS05235 sugar dehydratase 0.57 RS_RS10750 sugar ABC transporter substrate-binding protein
Ralstonia sp. UNC404CL21Col 0.13 ABZR87_RS10175 MucB/RseB C-terminal domain-containing protein 0.56 ABZR87_RS18690 sugar ABC transporter substrate-binding protein low > 80
Variovorax sp. OAS795 0.12 ABID97_RS08340 MucB/RseB C-terminal domain-containing protein 0.52 ABID97_RS07110 sugar ABC transporter substrate-binding protein low > 91
Variovorax sp. SCN45 0.12 GFF3865 Sigma factor RpoE negative regulatory protein RseB precursor 0.54 GFF5272 Various polyols ABC transporter, substrate-binding protein low > 127

Not shown: 39 genomes with orthologs for PFLU_RS07240 only; 9 genomes with orthologs for PFLU_RS13405 only