Conservation of cofitness between PFLU_RS02430 and PFLU_RS04650 in Pseudomonas fluorescens SBW25

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 1.0 PFLU_RS04650 ABC transporter substrate-binding protein 0.85 4
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 1.00 PFLU_RS04650 ABC transporter substrate-binding protein low > 109
Pseudomonas simiae WCS417 0.98 PS417_02355 thiamine biosynthesis protein ThiC 0.93 PS417_04585 hypothetical protein low > 88
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_0544 hydroxymethylpyrimidine synthase 0.70 Psyr_4113 LppC putative lipoprotein 0.47 78
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_0544 hydroxymethylpyrimidine synthase 0.70 Psyr_4113 LppC putative lipoprotein low > 86
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_13010 thiamine biosynthesis protein ThiC 0.79 AO353_15285 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.77 Pf6N2E2_5345 LppC putative lipoprotein low > 103
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_08810 thiamine biosynthesis protein ThiC 0.77 AO356_17105 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.78 Pf1N1B4_954 LppC putative lipoprotein — —
Pseudomonas sp. RS175 0.94 PFR28_05091 Phosphomethylpyrimidine synthase 0.75 PFR28_03598 Penicillin-binding protein activator LpoA low > 88
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.78 PfGW456L13_1642 LppC putative lipoprotein low > 87
Pseudomonas putida KT2440 0.91 PP_4922 Phosphomethylpyrimidine synthase 0.68 PP_1325 putative lipoprotein low > 96
Pseudomonas sp. S08-1 0.89 OH686_15885 phosphomethylpyrimidine synthase 0.67 OH686_08345 Penicillin-binding protein activator LpoA low > 80
Pseudomonas stutzeri RCH2 0.89 Psest_0477 thiamine biosynthesis protein ThiC 0.55 Psest_3271 Putative lipoprotein — —
Dyella japonica UNC79MFTsu3.2 0.75 ABZR86_RS17230 phosphomethylpyrimidine synthase ThiC 0.15 ABZR86_RS11385 penicillin-binding protein activator — —
Rhodanobacter sp. FW510-T8 0.74 OKGIIK_16965 thiC phosphomethylpyrimidine synthase ThiC 0.15 OKGIIK_11740 LppC putative lipoprotein low > 52
Xanthomonas campestris pv. campestris strain 8004 0.73 Xcc-8004.1066.1 hypothetical protein 0.10 Xcc-8004.4373.1 LppC putative lipoprotein low > 74
Pectobacterium carotovorum WPP14 0.72 HER17_RS20380 phosphomethylpyrimidine synthase ThiC 0.15 HER17_RS19865 penicillin-binding protein activator low > 75
Shewanella loihica PV-4 0.71 Shew_2096 thiamine biosynthesis protein ThiC (RefSeq) 0.15 Shew_0227 LppC family lipoprotein (RefSeq) — —
Kangiella aquimarina DSM 16071 0.71 B158DRAFT_0295 hydroxymethylpyrimidine synthase 0.18 B158DRAFT_2108 Putative lipoprotein — —
Shewanella amazonensis SB2B 0.71 Sama_1860 thiamine biosynthesis protein ThiC (RefSeq) 0.17 Sama_3354 putative lipoprotein (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_00335 phosphomethylpyrimidine synthase 0.16 CSW01_03085 penicillin-binding protein activator — —
Shewanella oneidensis MR-1 0.69 SO2445 thiC thiamin biosynthesis protein ThiC (NCBI ptt file) 0.14 SO0300 lipoprotein, putative (NCBI ptt file) — —
Shewanella sp. ANA-3 0.69 Shewana3_1936 thiamine biosynthesis protein ThiC (RefSeq) 0.15 Shewana3_3880 LppC family lipoprotein (RefSeq) — —
Alteromonas macleodii MIT1002 0.68 MIT1002_00097 Phosphomethylpyrimidine synthase 0.13 MIT1002_03114 Lipoprotein activator of PBP from the outer membrane A low > 70

Not shown: 69 genomes with orthologs for PFLU_RS02430 only; 2 genomes with orthologs for PFLU_RS04650 only