Conservation of cofitness between OKFHMN_18215 and OKFHMN_18155 in Escherichia coli ECRC100

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_18215 diaA DnaA initiator-associating protein DiaA 1.0 OKFHMN_18155 deaD ATP-dependent RNA helicase DeaD 0.67 18
Escherichia coli ECRC62 1.00 BNILDI_01515 diaA DnaA initiator-associating protein DiaA 1.00 BNILDI_01580 deaD ATP-dependent RNA helicase DeaD low > 75
Escherichia coli ECRC98 1.00 JDDGAC_21840 diaA DnaA initiator-associating protein DiaA 1.00 JDDGAC_21780 deaD ATP-dependent RNA helicase DeaD low > 86
Escherichia fergusonii Becca 1.00 EFB2_00673 Osmotically-inducible protein Y 1.00 EFB2_00661 ATP-dependent RNA helicase DeaD low > 86
Escherichia coli ECRC101 1.00 MCAODC_08735 diaA DnaA initiator-associating protein DiaA 1.00 MCAODC_08675 deaD ATP-dependent RNA helicase DeaD low > 87
Escherichia coli BW25113 1.00 b3150 yraP hypothetical protein (NCBI) 1.00 b3162 deaD inducible ATP-independent RNA helicase (VIMSS) low > 76
Escherichia coli ECRC99 1.00 KEDOAH_09935 diaA DnaA initiator-associating protein DiaA 1.00 KEDOAH_09995 deaD ATP-dependent RNA helicase DeaD — —
Escherichia coli BL21 1.00 ECD_03017 outer membrane lipoprotein 1.00 ECD_03029 ATP-dependent RNA helicase low > 61
Escherichia coli Nissle 1917 1.00 ECOLIN_RS18105 division/outer membrane stress-associated lipid-binding lipoprotein 1.00 ECOLIN_RS18165 ATP-dependent RNA helicase DeaD low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00550 Osmotically-inducible protein Y 1.00 OHPLBJKB_00538 ATP-dependent RNA helicase DeaD low > 73
Escherichia coli ECRC102 1.00 NIAGMN_15975 diaA DnaA initiator-associating protein DiaA 1.00 NIAGMN_15915 deaD ATP-dependent RNA helicase DeaD — —
Escherichia coli ECOR27 0.99 NOLOHH_10015 dolP division/outer membrane stress-associated lipid-binding lipoprotein 1.00 NOLOHH_09955 deaD ATP-dependent RNA helicase DeaD low > 75
Escherichia coli ECOR38 0.99 HEPCGN_17090 dolP division/outer membrane stress-associated lipid-binding lipoprotein 1.00 HEPCGN_17030 deaD ATP-dependent RNA helicase DeaD low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF1517 21 kDa hemolysin precursor 0.89 GFF1504 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) low > 78
Enterobacter sp. TBS_079 0.83 MPMX20_04054 Osmotically-inducible protein Y 0.85 MPMX20_04066 ATP-dependent RNA helicase DeaD low > 85
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3199 Predicted periplasmic or secreted lipoprotein 0.84 EX28DRAFT_3211 Superfamily II DNA and RNA helicases — —
Serratia liquefaciens MT49 0.78 IAI46_22315 divisome-associated lipoprotein YraP 0.80 IAI46_01970 DEAD/DEAH family ATP-dependent RNA helicase low > 86
Klebsiella michiganensis M5al 0.77 BWI76_RS24930 osmotically-inducible protein OsmY 0.86 BWI76_RS25055 DEAD/DEAH family ATP-dependent RNA helicase — —
Dickeya dadantii 3937 0.76 DDA3937_RS01695 divisome-associated lipoprotein YraP 0.80 DDA3937_RS03100 DEAD/DEAH family ATP-dependent RNA helicase low > 74
Dickeya dianthicola ME23 0.75 DZA65_RS01665 divisome-associated lipoprotein YraP 0.78 DZA65_RS03270 DEAD/DEAH family ATP-dependent RNA helicase — —
Dickeya dianthicola 67-19 0.75 HGI48_RS01590 divisome-associated lipoprotein YraP 0.78 HGI48_RS03275 DEAD/DEAH family ATP-dependent RNA helicase low > 71
Erwinia tracheiphila SCR3 0.74 LU632_RS02210 yraP divisome-associated lipoprotein YraP 0.78 LU632_RS21030 DEAD/DEAH family ATP-dependent RNA helicase — —
Pantoea sp. MT58 0.72 IAI47_02830 divisome-associated lipoprotein YraP 0.78 IAI47_16990 DEAD/DEAH family ATP-dependent RNA helicase low > 76
Pectobacterium carotovorum WPP14 0.71 HER17_RS19880 divisome-associated lipoprotein YraP 0.78 HER17_RS18175 DEAD/DEAH family ATP-dependent RNA helicase low > 75
Rahnella sp. WP5 0.71 EX31_RS12530 divisome-associated lipoprotein YraP 0.80 EX31_RS08510 DEAD/DEAH family ATP-dependent RNA helicase low > 89
Shewanella oneidensis MR-1 0.39 SO0297 lipoprotein, putative (NCBI ptt file) 0.42 SO4034 deaD ATP-dependent RNA helicase DeaD (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.39 Shewana3_3883 transport-associated (RefSeq) 0.43 Shewana3_3595 DEAD/DEAH box helicase domain-containing protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.37 Sama_3357 putative lipoprotein (RefSeq) 0.45 Sama_0512 ATP-dependent RNA helicase DeaD (RefSeq) low > 62
Shewanella loihica PV-4 0.35 Shew_0224 transport-associated (RefSeq) 0.46 Shew_0531 DEAD/DEAH box helicase domain-containing protein (RefSeq) low > 60
Pseudomonas putida KT2440 0.33 PP_1322 putative Lipoprotein 0.36 PP_1868 ATP-dependent DEAD-box RNA helicase DeaD — —
Alteromonas macleodii MIT1002 0.32 MIT1002_03118 Osmotically-inducible protein Y precursor 0.45 MIT1002_00666 Cold-shock DEAD box protein A low > 70
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_03070 hemolysin 0.37 CSW01_18185 DEAD/DEAH box family ATP-dependent RNA helicase low > 62
Pseudomonas stutzeri RCH2 0.31 Psest_3274 Predicted periplasmic or secreted lipoprotein 0.36 Psest_1804 Superfamily II DNA and RNA helicases — —
Dechlorosoma suillum PS 0.30 Dsui_0099 putative periplasmic or secreted lipoprotein 0.46 Dsui_1351 DNA/RNA helicase, superfamily II low > 51
Pseudomonas fluorescens SBW25 0.29 PFLU_RS04635 BON domain-containing protein 0.36 PFLU_RS08490 DEAD/DEAH box helicase — —
Pseudomonas simiae WCS417 0.29 PS417_04570 phospholipid-binding protein 0.36 PS417_08540 RNA helicase — —
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS04635 BON domain-containing protein 0.36 PFLU_RS08490 DEAD/DEAH box helicase low > 109
Desulfovibrio vulgaris Hildenborough JW710 0.13 DVU0766 transporter, putative (TIGR) 0.31 DVU3310 deaD ATP-dependent RNA helicase, DEAD/DEAH family (TIGR) low > 55

Not shown: 3 genomes with orthologs for OKFHMN_18215 only; 28 genomes with orthologs for OKFHMN_18155 only