Conservation of cofitness between OKFHMN_09385 and OKFHMN_16415 in Escherichia coli ECRC100

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_09385 fimB integrase 1.0 OKFHMN_16415 prlC oligopeptidase A 0.74 2
Escherichia coli ECRC98 1.00 JDDGAC_13020 fimB integrase 1.00 JDDGAC_20045 prlC oligopeptidase A low > 86
Escherichia coli ECRC102 1.00 NIAGMN_07435 fimB integrase 1.00 NIAGMN_14180 prlC oligopeptidase A — —
Klebsiella michiganensis M5al 0.91 BWI76_RS05825 putative site specific integrase 0.92 BWI76_RS26610 oligopeptidase A low > 92
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2648 Integrase 0.94 EX28DRAFT_4063 Zn-dependent oligopeptidases low > 76
Pectobacterium carotovorum WPP14 0.75 HER17_RS04720 tyrosine-type recombinase/integrase 0.85 HER17_RS21300 oligopeptidase A low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS16520 tyrosine-type recombinase/integrase 0.83 DDA3937_RS21265 oligopeptidase A low > 74
Rahnella sp. WP5 0.66 EX31_RS20945 tyrosine-type recombinase/integrase 0.82 EX31_RS05165 oligopeptidase A low > 89
Serratia liquefaciens MT49 0.65 IAI46_05415 tyrosine-type recombinase/integrase 0.83 IAI46_24210 oligopeptidase A low > 86
Dickeya dianthicola 67-19 0.63 HGI48_RS14775 tyrosine-type recombinase/integrase 0.82 HGI48_RS00045 oligopeptidase A 0.46 30
Pseudomonas stutzeri RCH2 0.59 Psest_4016 Integrase 0.57 Psest_4320 Zn-dependent oligopeptidases low > 67
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS02275 integrase arm-type DNA-binding domain-containing protein 0.50 ABZR86_RS14940 M3 family metallopeptidase low > 74
Dechlorosoma suillum PS 0.40 Dsui_0218 Integrase 0.49 Dsui_0046 Zn-dependent oligopeptidase low > 51
Pseudomonas sp. S08-1 0.40 OH686_21775 Phage integrase 0.56 OH686_12360 Oligopeptidase A low > 80
Dickeya dianthicola ME23 0.39 DZA65_RS04000 tyrosine-type recombinase/integrase 0.83 DZA65_RS00035 oligopeptidase A low > 75
Pseudomonas simiae WCS417 0.38 PS417_10250 integrase 0.57 PS417_00245 oligopeptidase A low > 88
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS09280 DUF4102 domain-containing protein 0.56 PFLU_RS00240 oligopeptidase A low > 109
Pseudomonas fluorescens SBW25 0.37 PFLU_RS09280 DUF4102 domain-containing protein 0.56 PFLU_RS00240 oligopeptidase A low > 109
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_11495 integrase 0.56 AO353_10775 oligopeptidase A low > 101
Shewanella sp. ANA-3 0.36 Shewana3_2953 phage integrase family protein (RefSeq) 0.65 Shewana3_4051 oligopeptidase A (RefSeq) low > 73
Shewanella oneidensis MR-1 0.35 SO1471 site-specific recombinase, phage integrase family (NCBI ptt file) 0.65 SO4699 prlC oligopeptidase A (NCBI ptt file) low > 76
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS18370 integrase 0.46 RR42_RS07340 oligopeptidase A 0.25 126
Shewanella loihica PV-4 0.33 Shew_1267 phage integrase family protein (RefSeq) 0.66 Shew_3657 oligopeptidase A (RefSeq) low > 60
Rhodanobacter denitrificans MT42 0.32 LRK55_RS10445 tyrosine-type recombinase/integrase 0.48 LRK55_RS08380 M3 family metallopeptidase low > 63
Ralstonia solanacearum UW163 0.29 UW163_RS08775 integrase 0.47 UW163_RS15000 oligopeptidase A — —
Ralstonia solanacearum PSI07 0.28 RPSI07_RS12430 DUF4102 domain-containing protein 0.46 RPSI07_RS15795 oligopeptidase A low > 81
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_3004 Integrase 0.56 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) low > 87
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS10240 tyrosine-type recombinase/integrase 0.48 QEN71_RS05695 M3 family metallopeptidase low > 153
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_01203 Prophage integrase IntA 1.00 OHPLBJKB_00205 Oligopeptidase A low > 73
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS32385 integrase 0.48 BPHYT_RS12875 oligopeptidase A low > 109
Alteromonas macleodii MIT1002 0.16 MIT1002_04073 Putative prophage CPS-53 integrase 0.64 MIT1002_03633 Oligopeptidase A low > 70

Not shown: 7 genomes with orthologs for OKFHMN_09385 only; 42 genomes with orthologs for OKFHMN_16415 only