Conservation of cofitness between NOLOHH_07195 and NOLOHH_21130 in Escherichia coli ECOR27

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_07195 dgoR D-galactonate utilization transcriptional regulator DgoR 1.0 NOLOHH_21130 yceD 23S rRNA accumulation protein YceD 0.52 12
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21280 D-galactonate utilization transcriptional regulator DgoR 1.00 ECOLIN_RS06290 23S rRNA accumulation protein YceD low > 55
Escherichia coli BL21 1.00 ECD_03578 D-galactonate catabolism operon transcriptional repressor 1.00 ECD_01084 DUF177 family protein low > 61
Escherichia fergusonii Becca 1.00 EFB2_00008 HTH-type transcriptional regulator LutR 1.00 EFB2_02887 Large ribosomal RNA subunit accumulation protein YceD low > 86
Escherichia coli ECOR38 1.00 HEPCGN_13760 dgoR D-galactonate utilization transcriptional regulator DgoR 1.00 HEPCGN_23880 yceD 23S rRNA accumulation protein YceD low > 87
Escherichia coli BW25113 1.00 b4479 dgoR predicted DNA-binding transcriptional regulator (NCBI) 1.00 b1088 yceD hypothetical protein (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_04335 dgoR D-galactonate utilization transcriptional regulator DgoR 1.00 BNILDI_19290 yceD 23S rRNA accumulation protein YceD low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00008 HTH-type transcriptional regulator LutR 0.99 OHPLBJKB_02578 Large ribosomal RNA subunit accumulation protein YceD low > 73
Enterobacter asburiae PDN3 0.96 EX28DRAFT_3982 Transcriptional regulators 0.94 EX28DRAFT_1841 Predicted metal-binding, possibly nucleic acid-binding protein low > 76
Enterobacter sp. TBS_079 0.96 MPMX20_00008 HTH-type transcriptional regulator LutR 0.94 MPMX20_01768 Large ribosomal RNA subunit accumulation protein YceD low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF1762 D-Galactonate repressor DgoR 0.97 GFF3370 COG1399 protein, clustered with ribosomal protein L32p low > 78
Klebsiella michiganensis M5al 0.96 BWI76_RS27950 transcriptional regulator 0.87 BWI76_RS11065 hypothetical protein
Rahnella sp. WP5 0.82 EX31_RS10335 D-galactonate utilization transcriptional regulator DgoR 0.85 EX31_RS24410 23S rRNA accumulation protein YceD 0.74 32
Dickeya dianthicola ME23 0.82 DZA65_RS07270 D-galactonate utilization transcriptional regulator DgoR 0.83 DZA65_RS13680 23S rRNA accumulation protein YceD
Dickeya dianthicola 67-19 0.82 HGI48_RS06925 D-galactonate utilization transcriptional regulator DgoR 0.82 HGI48_RS13210 23S rRNA accumulation protein YceD low > 71
Pantoea sp. MT58 0.71 IAI47_00030 FadR family transcriptional regulator 0.79 IAI47_12095 23S rRNA accumulation protein YceD
Serratia liquefaciens MT49 0.26 IAI46_03180 FadR family transcriptional regulator 0.73 IAI46_09765 23S rRNA accumulation protein YceD
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_3321 Transcriptional regulator of the arabinose operon in Shewanella, GntR family 0.17 PfGW456L13_2101 COG1399 protein, clustered with ribosomal protein L32p
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_4620 Transcriptional regulator of the arabinose operon in Shewanella, GntR family 0.17 Pf1N1B4_455 COG1399 protein, clustered with ribosomal protein L32p
Pseudomonas sp. RS175 0.25 PFR28_01578 HTH-type transcriptional regulator LutR 0.22 PFR28_03014 Large ribosomal RNA subunit accumulation protein YceD
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_608 Transcriptional regulator of the arabinose operon in Shewanella, GntR family 0.16 Pf6N2E2_5948 COG1399 protein, clustered with ribosomal protein L32p
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_24580 GntR family transcriptional regulator 0.16 AO356_20145 metal-binding protein
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS03660 FadR/GntR family transcriptional regulator 0.18 ABZR86_RS06190 YceD family protein low > 74
Pseudomonas simiae WCS417 0.23 PS417_10995 GntR family transcriptional regulator 0.17 PS417_21460 metal-binding protein
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_1707 transcriptional regulator, GntR family 0.16 Psyr_1643 Protein of unknown function DUF177
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_1707 transcriptional regulator, GntR family 0.16 Psyr_1643 Protein of unknown function DUF177
Shewanella sp. ANA-3 0.23 Shewana3_2068 GntR family transcriptional regulator (RefSeq) 0.44 Shewana3_2563 hypothetical protein (RefSeq)
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS11620 FadR family transcriptional regulator 0.18 PFLU_RS23075 hypothetical protein
Pseudomonas fluorescens SBW25 0.23 PFLU_RS11620 FadR family transcriptional regulator 0.18 PFLU_RS23075 hypothetical protein low > 109
Lysobacter sp. OAE881 0.22 ABIE51_RS10925 FadR/GntR family transcriptional regulator 0.21 ABIE51_RS13965 YceD family protein
Marinobacter adhaerens HP15 0.16 HP15_1619 GntR domain protein 0.25 HP15_2217 protein containing DUF177

Not shown: 12 genomes with orthologs for NOLOHH_07195 only; 21 genomes with orthologs for NOLOHH_21130 only