Conservation of cofitness between IAI47_06865 and IAI47_08840 in Pantoea sp. MT58

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_06865 multidrug efflux RND transporter permease subunit MdtC 1.0 IAI47_08840 ribonuclease D 0.40 4
Serratia liquefaciens MT49 0.80 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC 0.68 IAI46_14530 ribonuclease D low > 86
Enterobacter asburiae PDN3 0.80 EX28DRAFT_0482 Cation/multidrug efflux pump 0.66 EX28DRAFT_0755 ribonuclease D low > 76
Enterobacter sp. TBS_079 0.79 MPMX20_03062 Multidrug resistance protein MdtC 0.65 MPMX20_02710 Ribonuclease D low > 85
Escherichia coli ECRC62 0.79 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC 0.66 BNILDI_15910 rnd ribonuclease D — —
Escherichia coli ECRC98 0.79 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC 0.66 JDDGAC_01180 rnd ribonuclease D — —
Escherichia coli ECRC101 0.79 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC 0.66 OKFHMN_26605 rnd ribonuclease D — —
Escherichia coli ECRC102 0.79 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC 0.66 NIAGMN_01460 rnd ribonuclease D — —
Escherichia coli ECRC99 0.79 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC 0.66 KEDOAH_01505 rnd ribonuclease D — —
Escherichia coli ECRC101 0.79 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC 0.66 MCAODC_18805 rnd ribonuclease D — —
Escherichia coli BW25113 0.79 b2076 mdtC multidrug efflux system, subunit C (NCBI) 0.67 b1804 rnd ribonuclease D (NCBI) low > 76
Escherichia coli ECOR27 0.79 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC 0.66 NOLOHH_17125 rnd ribonuclease D — —
Escherichia coli BL21 0.79 ECD_01981 multidrug efflux system, subunit C 0.67 ECD_01774 ribonuclease D low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_01628 Multidrug resistance protein MdtC 0.66 OHPLBJKB_01929 Ribonuclease D low > 73
Escherichia coli Nissle 1917 0.78 ECOLIN_RS12205 multidrug efflux RND transporter permease subunit MdtC 0.66 ECOLIN_RS10035 ribonuclease D — —
Escherichia coli ECOR38 0.78 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC 0.66 HEPCGN_04995 rnd ribonuclease D low > 85
Escherichia fergusonii Becca 0.78 EFB2_01779 Multidrug resistance protein MdtC 0.66 EFB2_02196 Ribonuclease D low > 86
Dickeya dadantii 3937 0.78 DDA3937_RS15270 multidrug efflux RND transporter permease subunit MdtC 0.65 DDA3937_RS11220 ribonuclease D low > 74
Pectobacterium carotovorum WPP14 0.78 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC 0.62 HER17_RS11270 ribonuclease D low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF3853 Multidrug transporter MdtC 0.67 GFF2819 Ribonuclease D (EC 3.1.26.3) low > 78
Dickeya dianthicola 67-19 0.78 HGI48_RS15350 multidrug efflux RND transporter permease subunit MdtC 0.65 HGI48_RS11255 ribonuclease D low > 71
Dickeya dianthicola ME23 0.78 DZA65_RS16170 multidrug efflux RND transporter permease subunit MdtC 0.65 DZA65_RS11600 ribonuclease D low > 75
Klebsiella michiganensis M5al 0.77 BWI76_RS19260 multidrug transporter subunit MdtC 0.65 BWI76_RS17795 ribonuclease D low > 92
Erwinia tracheiphila SCR3 0.75 LU632_RS08685 mdtC multidrug efflux RND transporter permease subunit MdtC 0.67 LU632_RS13130 rnd ribonuclease D low > 74
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_22900 acriflavine resistance protein B 0.26 AO353_17855 ribonuclease D low > 101
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_3265 Acriflavin resistance plasma membrane protein 0.27 PfGW456L13_4496 Ribonuclease D (EC 3.1.26.3) low > 87
Pseudomonas sp. S08-1 0.54 OH686_00930 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) 0.28 OH686_05315 ribonuclease D low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_2484 Acriflavin resistance protein 0.27 Psyr_1563 Ribonuclease D low > 86
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_2484 Acriflavin resistance protein 0.27 Psyr_1563 Ribonuclease D low > 86
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS13435 MMPL family transporter 0.26 PFLU_RS07465 ribonuclease D low > 109
Pseudomonas fluorescens SBW25 0.54 PFLU_RS13435 MMPL family transporter 0.26 PFLU_RS07465 ribonuclease D low > 109
Pseudomonas stutzeri RCH2 0.53 Psest_2140 Cation/multidrug efflux pump 0.27 Psest_2995 ribonuclease D — —
Pseudomonas simiae WCS417 0.53 PS417_12750 acriflavine resistance protein B 0.26 PS417_07375 ribonuclease D low > 88
Pseudomonas putida KT2440 0.52 PP_3583 multidrug efflux transport system - membrane subunit 0.28 PP_4591 Ribonuclease D low > 96
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_25880 acriflavine resistance protein B 0.26 AO356_04420 ribonuclease D low > 104
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_1271 Acriflavin resistance plasma membrane protein 0.26 Pf6N2E2_2727 Ribonuclease D (EC 3.1.26.3) low > 103
Pseudomonas sp. RS175 0.51 PFR28_02193 Multidrug resistance protein MdtC 0.27 PFR28_00712 Ribonuclease D low > 88
Rhodopseudomonas palustris CGA009 0.48 TX73_018025 multidrug efflux RND transporter permease subunit 0.20 TX73_015755 ribonuclease D low > 86
Azospirillum brasilense Sp245 0.43 AZOBR_RS14670 multidrug transporter 0.21 AZOBR_RS16220 ribonuclease D low > 97
Bosea sp. OAE506 0.40 ABIE41_RS20140 efflux RND transporter permease subunit 0.20 ABIE41_RS16115 ribonuclease D — —
Rhizobium sp. OAE497 0.38 ABIE40_RS05760 efflux RND transporter permease subunit 0.21 ABIE40_RS06640 ribonuclease D — —
Agrobacterium fabrum C58 0.37 Atu3274 AcrB/AcrD/AcrF family protein 0.20 Atu1151 ribonuclease D — —
Sinorhizobium meliloti 1021 0.23 SMc01457 transport transmembrane protein 0.21 SMc00622 ribonuclease D protein low > 103
Caulobacter crescentus NA1000 0.19 CCNA_03301 cation/multidrug efflux pump AcrB 0.21 CCNA_01776 ribonuclease D — —
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_03301 cation/multidrug efflux pump AcrB 0.21 CCNA_01776 ribonuclease D — —

Not shown: 17 genomes with orthologs for IAI47_06865 only; 23 genomes with orthologs for IAI47_08840 only