Conservation of cofitness between HSERO_RS12500 and HSERO_RS23170 in Herbaspirillum seropedicae SmR1

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS12500 malto-oligosyltrehalose trehalohydrolase 1.0 HSERO_RS23170 ATPase AAA 0.41 6
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS17205 malto-oligosyltrehalose trehalohydrolase 0.34 ABZR87_RS23515 sigma-54 dependent transcriptional regulator low > 80
Ralstonia solanacearum PSI07 0.49 RPSI07_RS00875 malto-oligosyltrehalose trehalohydrolase 0.35 RPSI07_RS07835 sigma-54-dependent Fis family transcriptional regulator low > 81
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS22315 malto-oligosyltrehalose trehalohydrolase 0.36 RALBFv3_RS23315 sigma-54-dependent Fis family transcriptional regulator 0.54 26
Ralstonia solanacearum UW163 0.49 UW163_RS22860 malto-oligosyltrehalose trehalohydrolase 0.36 UW163_RS16565 sigma-54-dependent Fis family transcriptional regulator — —
Ralstonia solanacearum GMI1000 0.49 RS_RS18295 malto-oligosyltrehalose trehalohydrolase 0.36 RS_RS25105 sigma-54-dependent Fis family transcriptional regulator 0.39 55
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_1077 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) 0.38 Pf6N2E2_5122 Type IV fimbriae expression regulatory protein PilR low > 103
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_23770 malto-oligosyltrehalose trehalohydrolase 0.39 AO353_16225 Fis family transcriptional regulator low > 101
Pseudomonas sp. RS175 0.48 PFR28_02146 1,4-alpha-glucan branching enzyme GlgB 0.37 PFR28_03751 Regulatory protein AtoC low > 88
Pseudomonas stutzeri RCH2 0.48 Psest_2171 malto-oligosyltrehalose trehalohydrolase 0.37 Psest_0705 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains low > 67
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_4686 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) 0.37 Pf1N1B4_2818 Type IV fimbriae expression regulatory protein PilR low > 87
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_26020 malto-oligosyltrehalose trehalohydrolase 0.38 AO356_15905 transcriptional regulator low > 104
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS33790 malto-oligosyltrehalose trehalohydrolase 0.48 BPHYT_RS30045 ATPase AAA low > 109
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_06052 maltooligosyl trehalose hydrolase 0.47 H281DRAFT_01779 DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains low > 103
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_2993 maltooligosyl trehalose hydrolase 0.36 Psyr_0722 Two-component response regulator PilR low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_2993 maltooligosyl trehalose hydrolase 0.36 Psyr_0722 Two-component response regulator PilR low > 86
Pseudomonas simiae WCS417 0.46 PS417_14485 malto-oligosyltrehalose trehalohydrolase 0.39 PS417_05525 Fis family transcriptional regulator low > 88
Pseudomonas putida KT2440 0.46 PP_4051 malto-oligosyltrehalose trehalohydrolase 0.36 PP_4371 two component system AtoC DNA-binding transcriptional activator low > 96
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS16415 malto-oligosyltrehalose trehalohydrolase 0.39 PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.46 PFLU_RS16415 malto-oligosyltrehalose trehalohydrolase 0.39 PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator low > 109
Variovorax sp. SCN45 0.40 GFF771 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) 0.50 GFF3669 Two-component system response regulator protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF2550 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) 0.40 GFF4188 Response regulator of zinc sigma-54-dependent two-component system low > 78
Klebsiella michiganensis M5al 0.33 BWI76_RS14130 malto-oligosyltrehalose trehalohydrolase 0.39 BWI76_RS01605 transcriptional regulatory protein ZraR low > 92
Pontibacter actiniarum KMM 6156, DSM 19842 0.30 CA264_11155 malto-oligosyltrehalose trehalohydrolase 0.36 CA264_04380 response regulator low > 74

Not shown: 17 genomes with orthologs for HSERO_RS12500 only; 26 genomes with orthologs for HSERO_RS23170 only