Conservation of cofitness between HSERO_RS21710 and HSERO_RS22955 in Herbaspirillum seropedicae SmR1

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS21710 antibiotic resistance protein MarC 1.0 HSERO_RS22955 D-amino acid dehydrogenase 0.38 20
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF2690 Multiple antibiotic resistance protein marC 0.32 GFF4939 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) low > 90
Paraburkholderia sabiae LMG 24235 0.31 QEN71_RS08795 MarC family protein 0.23 QEN71_RS31650 FAD-dependent oxidoreductase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_02837 multiple antibiotic resistance protein 0.23 H281DRAFT_06095 D-amino-acid dehydrogenase low > 103
Paraburkholderia graminis OAS925 0.29 ABIE53_005956 multiple antibiotic resistance protein 0.18 ABIE53_004136 D-amino-acid dehydrogenase low > 113
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS26390 antibiotic resistance protein 0.27 BPHYT_RS26530 amino acid dehydrogenase low > 109
Rhodospirillum rubrum S1H 0.21 Rru_A0654 Multiple antibiotic resistance (MarC)-related proteins (NCBI) 0.25 Rru_A2064 FAD dependent oxidoreductase (NCBI) low > 58
Shewanella loihica PV-4 0.19 Shew_1911 hypothetical protein (RefSeq) 0.23 Shew_2360 D-hydroxyproline dehydrogenase (from data) — —
Shewanella amazonensis SB2B 0.18 Sama_1694 hypothetical protein (RefSeq) 0.24 Sama_1533 D-amino-acid dehydrogenase (RefSeq) low > 62
Sinorhizobium meliloti 1021 0.18 SMc01232 hypothetical protein 0.30 SMc03265 amino acid dehydrogenase transmembrane protein low > 103
Rhizobium sp. OAE497 0.17 ABIE40_RS09370 MarC family protein 0.23 ABIE40_RS02050 FAD-dependent oxidoreductase low > 107
Castellaniella sp019104865 MT123 0.17 ABCV34_RS00685 MarC family protein 0.24 ABCV34_RS10190 FAD-dependent oxidoreductase low > 48
Ralstonia solanacearum GMI1000 0.17 RS_RS14775 membrane protein 0.29 RS_RS02525 FAD-dependent oxidoreductase — —
Ralstonia solanacearum IBSBF1503 0.17 RALBFv3_RS06830 membrane protein 0.29 RALBFv3_RS11700 FAD-dependent oxidoreductase — —
Ralstonia solanacearum UW163 0.17 UW163_RS06785 membrane protein 0.29 UW163_RS01885 FAD-dependent oxidoreductase — —
Ralstonia sp. UNC404CL21Col 0.16 ABZR87_RS02485 MarC family protein 0.28 ABZR87_RS07655 FAD-dependent oxidoreductase low > 80
Bosea sp. OAE506 0.16 ABIE41_RS15150 MarC family protein 0.28 ABIE41_RS13645 FAD-binding oxidoreductase — —
Phaeobacter inhibens DSM 17395 0.16 PGA1_c19770 membrane protein, MarC family 0.23 PGA1_c05140 D-amino acid dehydrogenase small subunit low > 62
Variovorax sp. OAS795 0.16 ABID97_RS00755 MarC family protein 0.53 ABID97_RS21150 FAD-dependent oxidoreductase low > 91
Variovorax sp. SCN45 0.16 GFF3614 UPF0056 inner membrane protein YchE 0.56 GFF6784 D-amino acid dehydrogenase (EC 1.4.99.6) low > 127
Agrobacterium fabrum C58 0.16 Atu1508 hypothetical protein 0.25 Atu3364 D-amino acid dehydrogenase low > 89
Ralstonia solanacearum PSI07 0.15 RPSI07_RS10405 membrane protein 0.29 RPSI07_RS21515 FAD-dependent oxidoreductase — —
Pseudomonas fluorescens GW456-L13 0.14 PfGW456L13_60 membrane protein, MarC family 0.20 PfGW456L13_3586 D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster 0.28 57
Pseudomonas simiae WCS417 0.13 PS417_02925 membrane protein 0.18 PS417_14320 FAD-dependent oxidoreductase low > 88
Pseudomonas putida KT2440 0.13 PP_4825 Membrane protein, MarC family 0.20 PP_1255 putative cis-4-hydroxy-D-proline oxidase low > 96
Pseudomonas fluorescens SBW25 0.13 PFLU_RS03000 MarC family protein 0.20 PFLU_RS16215 FAD-binding oxidoreductase low > 109
Pseudomonas fluorescens SBW25-INTG 0.13 PFLU_RS03000 MarC family protein 0.20 PFLU_RS16215 FAD-binding oxidoreductase low > 109

Not shown: 63 genomes with orthologs for HSERO_RS21710 only; 1 genomes with orthologs for HSERO_RS22955 only