Conservation of cofitness between HSERO_RS20770 and HSERO_RS22955 in Herbaspirillum seropedicae SmR1

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS20770 MFS transporter 1.0 HSERO_RS22955 D-amino acid dehydrogenase 0.33 17
Ralstonia sp. UNC404CL21Col 0.70 ABZR87_RS06820 cytochrome c oxidase subunit 3 0.28 ABZR87_RS07655 FAD-dependent oxidoreductase low > 80
Ralstonia solanacearum PSI07 0.69 RPSI07_RS22340 cytochrome c oxidase subunit 3 0.29 RPSI07_RS21515 FAD-dependent oxidoreductase low > 81
Ralstonia solanacearum GMI1000 0.69 RS_RS01805 cytochrome c oxidase subunit 3 0.29 RS_RS02525 FAD-dependent oxidoreductase low > 80
Ralstonia solanacearum IBSBF1503 0.69 RALBFv3_RS10965 cytochrome c oxidase subunit 3 0.29 RALBFv3_RS11700 FAD-dependent oxidoreductase low > 76
Ralstonia solanacearum UW163 0.69 UW163_RS02615 cytochrome c oxidase subunit 3 0.29 UW163_RS01885 FAD-dependent oxidoreductase — —
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS01520 cytochrome c oxidase subunit 3 0.23 QEN71_RS31650 FAD-dependent oxidoreductase low > 153
Castellaniella sp019104865 MT123 0.62 ABCV34_RS13255 cytochrome c oxidase subunit 3 0.24 ABCV34_RS10190 FAD-dependent oxidoreductase low > 48
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_01990 cytochrome c oxidase subunit 3 0.23 H281DRAFT_06095 D-amino-acid dehydrogenase low > 103
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS02665 MFS transporter 0.27 BPHYT_RS26530 amino acid dehydrogenase low > 109
Paraburkholderia graminis OAS925 0.61 ABIE53_000678 cytochrome c oxidase subunit 3 0.18 ABIE53_004136 D-amino-acid dehydrogenase low > 113
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF693 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.32 GFF4939 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) low > 90
Variovorax sp. SCN45 0.61 GFF2302 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.56 GFF6784 D-amino acid dehydrogenase (EC 1.4.99.6) low > 127
Variovorax sp. OAS795 0.60 ABID97_RS23940 cytochrome c oxidase subunit 3 0.53 ABID97_RS21150 FAD-dependent oxidoreductase low > 91
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS00305 cytochrome c oxidase subunit 3 0.20 PFLU_RS16215 FAD-binding oxidoreductase low > 109
Pseudomonas fluorescens SBW25 0.52 PFLU_RS00305 cytochrome c oxidase subunit 3 0.20 PFLU_RS16215 FAD-binding oxidoreductase low > 109
Pseudomonas simiae WCS417 0.51 PS417_00315 MFS transporter 0.18 PS417_14320 FAD-dependent oxidoreductase low > 88
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_611 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.20 PfGW456L13_3586 D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster low > 87
Shewanella loihica PV-4 0.48 Shew_0122 cytochrome c oxidase, subunit III (RefSeq) 0.23 Shew_2360 D-hydroxyproline dehydrogenase (from data) low > 60
Pseudomonas putida KT2440 0.45 PP_0106 cytochrome c oxidase subunit 3 0.20 PP_1255 putative cis-4-hydroxy-D-proline oxidase low > 96
Shewanella amazonensis SB2B 0.44 Sama_3486 cytochrome c oxidase subunit III (RefSeq) 0.24 Sama_1533 D-amino-acid dehydrogenase (RefSeq) low > 62
Rhizobium sp. OAE497 0.33 ABIE40_RS04085 cytochrome c oxidase subunit 3 0.23 ABIE40_RS02050 FAD-dependent oxidoreductase low > 107
Agrobacterium fabrum C58 0.32 Atu0771 cytochrome c oxidase subunit III 0.25 Atu3364 D-amino acid dehydrogenase low > 89
Rhodopseudomonas palustris CGA009 0.31 TX73_004310 cytochrome c oxidase subunit 3 0.17 TX73_019540 FAD-dependent oxidoreductase low > 86
Sinorhizobium meliloti 1021 0.30 SMc00013 cytochrome C oxidase subunit III transmembrane protein 0.30 SMc03265 amino acid dehydrogenase transmembrane protein low > 103
Bosea sp. OAE506 0.28 ABIE41_RS22970 cytochrome c oxidase subunit 3 0.28 ABIE41_RS13645 FAD-binding oxidoreductase low > 77
Phaeobacter inhibens DSM 17395 0.26 PGA1_c06290 cytochrome c oxidase subunit 3 0.23 PGA1_c05140 D-amino acid dehydrogenase small subunit — —

Not shown: 28 genomes with orthologs for HSERO_RS20770 only; 1 genomes with orthologs for HSERO_RS22955 only