Conservation of cofitness between HSERO_RS03615 and HSERO_RS20615 in Herbaspirillum seropedicae SmR1

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS03615 (dimethylallyl)adenosine tRNA methylthiotransferase 1.0 HSERO_RS20615 phenylacetate-CoA oxygenase subunit PaaB 0.26 19
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS02195 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.68 QEN71_RS28400 1,2-phenylacetyl-CoA epoxidase subunit PaaB low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.75 GFF613 tRNA-i(6)A37 methylthiotransferase 0.62 GFF1686 Phenylacetate-CoA oxygenase, PaaH subunit low > 90
Burkholderia phytofirmans PsJN 0.75 BPHYT_RS16535 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.67 BPHYT_RS18255 phenylacetate-CoA oxygenase subunit PaaB low > 109
Paraburkholderia bryophila 376MFSha3.1 0.75 H281DRAFT_04239 tRNA-i(6)A37 thiotransferase enzyme MiaB 0.67 H281DRAFT_05857 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB low > 103
Ralstonia solanacearum PSI07 0.73 RPSI07_RS21380 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.63 RPSI07_RS02135 1,2-phenylacetyl-CoA epoxidase subunit B low > 81
Ralstonia solanacearum IBSBF1503 0.73 RALBFv3_RS11825 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.63 RALBFv3_RS20655 1,2-phenylacetyl-CoA epoxidase subunit B low > 76
Cupriavidus basilensis FW507-4G11 0.73 RR42_RS02855 dimethylallyladenosine tRNA methylthiotransferase 0.66 RR42_RS23730 phenylacetate-CoA oxygenase subunit PaaB low > 128
Ralstonia solanacearum UW163 0.73 UW163_RS01760 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.63 UW163_RS18520 1,2-phenylacetyl-CoA epoxidase subunit B
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS07780 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.63 ABZR87_RS21255 1,2-phenylacetyl-CoA epoxidase subunit PaaB low > 80
Ralstonia solanacearum GMI1000 0.73 RS_RS02645 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.63 RS_RS20010 1,2-phenylacetyl-CoA epoxidase subunit B low > 80
Variovorax sp. SCN45 0.71 GFF7320 tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) 0.67 GFF6094 1,2-phenylacetyl-CoA epoxidase, subunit B (EC 1.14.13.149) low > 127
Variovorax sp. OAS795 0.71 ABID97_RS06475 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.66 ABID97_RS22790 1,2-phenylacetyl-CoA epoxidase subunit PaaB low > 91
Marinobacter adhaerens HP15 0.64 HP15_2466 tRNA-i(6)A37 thiotransferase enzyme MiaB 0.62 HP15_2698 phenylacetate-CoA oxygenase, PaaH subunit low > 73
Escherichia coli ECRC62 0.62 BNILDI_21610 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.63 BNILDI_17940 paaB 1,2-phenylacetyl-CoA epoxidase subunit B low > 75
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_1380 tRNA-i(6)A37 methylthiotransferase 0.64 PfGW456L13_2426 Phenylacetate-CoA oxygenase, PaaH subunit low > 87
Escherichia coli BW25113 0.62 b0661 miaB isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) 0.63 b1389 paaB predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation (NCBI)
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_03051 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.63 OHPLBJKB_02322 1,2-phenylacetyl-CoA epoxidase, subunit B low > 73
Escherichia coli ECOR27 0.62 NOLOHH_23605 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.63 NOLOHH_19485 paaB 1,2-phenylacetyl-CoA epoxidase subunit B low > 75
Serratia liquefaciens MT49 0.62 IAI46_06025 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.67 IAI46_16355 1,2-phenylacetyl-CoA epoxidase subunit B low > 86
Klebsiella michiganensis M5al 0.61 BWI76_RS08135 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.65 BWI76_RS13095 phenylacetate-CoA oxygenase subunit PaaB
Enterobacter sp. TBS_079 0.60 MPMX20_01311 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.64 MPMX20_02143 1,2-phenylacetyl-CoA epoxidase, subunit B 0.27 74
Enterobacter asburiae PDN3 0.60 EX28DRAFT_2310 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 0.64 EX28DRAFT_1419 phenylacetate-CoA oxygenase, PaaH subunit low > 76
Acinetobacter radioresistens SK82 0.56 MPMX26_02667 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.62 MPMX26_01559 1,2-phenylacetyl-CoA epoxidase, subunit B
Dinoroseobacter shibae DFL-12 0.45 Dshi_1019 RNA modification enzyme, MiaB family (RefSeq) 0.74 Dshi_3819 phenylacetate-CoA oxygenase, PaaH subunit (RefSeq) low > 64
Azospirillum sp. SherDot2 0.43 MPMX19_02511 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.68 MPMX19_05771 1,2-phenylacetyl-CoA epoxidase, subunit B low > 112
Sinorhizobium meliloti 1021 0.43 SMc01115 (dimethylallyl)adenosine tRNA methylthiotransferase 0.81 SM_b21639 phenylacetate-CoA oxygenase subunit PaaB low > 103
Phaeobacter inhibens DSM 17395 0.42 PGA1_c04710 (dimethylallyl)adenosine tRNA methylthiotransferase MiaB 0.78 PGA1_c04070 phenylacetic acid degradation protein PaaB low > 62
Rhodopseudomonas palustris CGA009 0.38 TX73_002325 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.60 TX73_019505 1,2-phenylacetyl-CoA epoxidase subunit B low > 86

Not shown: 73 genomes with orthologs for HSERO_RS03615 only; 2 genomes with orthologs for HSERO_RS20615 only