Conservation of cofitness between HSERO_RS03050 and HSERO_RS19990 in Herbaspirillum seropedicae SmR1

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS03050 hydrolase 1.0 HSERO_RS19990 acetyl-CoA acetyltransferase 0.30 20
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.4953.1 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase 0.62 Xcc-8004.477.1 Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) low > 74
Acidovorax sp. GW101-3H11 0.32 Ac3H11_108 Hydrolase 0.77 Ac3H11_3920 Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) low > 79
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_0186 HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 0.73 Psyr_4011 Thiolase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_0186 HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 0.73 Psyr_4011 Thiolase low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF5114 Hydrolase 0.76 GFF678 Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_2170 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase 0.72 Pf1N1B4_3234 Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) low > 87
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_841 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase 0.72 PfGW456L13_4590 Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) low > 87
Pseudomonas putida KT2440 0.29 PP_5231 putative (S)-2-haloacid dehalogenase 0.71 PP_3280 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase low > 96
Pseudomonas stutzeri RCH2 0.29 Psest_3768 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 0.70 Psest_3070 3-oxoadipyl-CoA thiolase low > 67
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_09055 HAD family hydrolase 0.73 AO353_17205 beta-ketoadipyl CoA thiolase low > 101
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_12720 HAD family hydrolase 0.71 AO356_04930 beta-ketoadipyl CoA thiolase low > 104
Pseudomonas simiae WCS417 0.28 PS417_27600 HAD family hydrolase 0.72 PS417_06710 beta-ketoadipyl CoA thiolase low > 88
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS29285 HAD-IA family hydrolase 0.73 PFLU_RS06735 3-oxoadipyl-CoA thiolase low > 109
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_4415 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase 0.71 Pf6N2E2_2835 Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) low > 103
Pseudomonas fluorescens SBW25 0.28 PFLU_RS29285 HAD-IA family hydrolase 0.73 PFLU_RS06735 3-oxoadipyl-CoA thiolase low > 109
Pseudomonas sp. RS175 0.27 PFR28_04379 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.74 PFR28_00622 Beta-ketoadipyl-CoA thiolase low > 88
Variovorax sp. SCN45 0.27 GFF502 Hydrolase 0.76 GFF2232 Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) low > 127
Variovorax sp. OAS795 0.27 ABID97_RS17655 HAD-IA family hydrolase 0.76 ABID97_RS24190 3-oxoadipyl-CoA thiolase low > 91
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.19 GFF240 'Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase' transl_table=11 0.38 GFF272 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 78
Shewanella oneidensis MR-1 0.19 SO4305 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein (NCBI ptt file) 0.36 SO0020 fadA fatty oxidation complex, beta subunit (NCBI ptt file) low > 76
Pantoea sp. MT58 0.19 IAI47_18395 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.37 IAI47_18235 acetyl-CoA C-acyltransferase FadA low > 76
Serratia liquefaciens MT49 0.18 IAI46_00730 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.70 IAI46_16165 3-oxoadipyl-CoA thiolase low > 86
Dickeya dadantii 3937 0.17 DDA3937_RS19885 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.36 DDA3937_RS20255 acetyl-CoA C-acyltransferase FadA low > 74
Shewanella sp. ANA-3 0.17 Shewana3_0394 HAD family hydrolase (RefSeq) 0.36 Shewana3_0023 fadA Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) low > 73
Dickeya dianthicola 67-19 0.15 HGI48_RS20040 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.36 HGI48_RS00970 acetyl-CoA C-acyltransferase FadA low > 71
Dickeya dianthicola ME23 0.15 DZA65_RS21085 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.36 DZA65_RS01030 acetyl-CoA C-acyltransferase FadA low > 75
Magnetospirillum magneticum AMB-1 0.11 AMB_RS12780 haloacid dehalogenase type II 0.72 AMB_RS13850 3-oxoadipyl-CoA thiolase low > 64
Cupriavidus basilensis FW507-4G11 0.10 RR42_RS12180 haloacid dehalogenase 0.82 RR42_RS35915 beta-ketoadipyl CoA thiolase low > 128

Not shown: 20 genomes with orthologs for HSERO_RS03050 only; 35 genomes with orthologs for HSERO_RS19990 only