Conservation of cofitness between HSERO_RS05365 and HSERO_RS19615 in Herbaspirillum seropedicae SmR1

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS05365 transporter 1.0 HSERO_RS19615 LysR family transcriptional regulator 0.25 17
Enterobacter sp. TBS_079 0.36 MPMX20_02689 Purine ribonucleoside efflux pump NepI 0.33 MPMX20_00723 Transcriptional activator protein NhaR low > 85
Pectobacterium carotovorum WPP14 0.36 HER17_RS16845 MFS transporter 0.35 HER17_RS02855 transcriptional activator NhaR low > 75
Rahnella sp. WP5 0.35 EX31_RS02065 MFS transporter 0.32 EX31_RS03885 transcriptional activator NhaR low > 89
Enterobacter asburiae PDN3 0.34 EX28DRAFT_0776 Arabinose efflux permease 0.33 EX28DRAFT_3629 Transcriptional regulator low > 76
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_29615 transporter 0.57 AO356_01805 LysR family transcriptional regulator low > 104
Pantoea sp. MT58 0.34 IAI47_17680 MFS transporter 0.32 IAI47_16160 transcriptional activator NhaR low > 76
Pseudomonas simiae WCS417 0.33 PS417_11060 transporter 0.56 PS417_10445 LysR family transcriptional regulator low > 88
Klebsiella michiganensis M5al 0.33 BWI76_RS27765 MFS transporter 0.33 BWI76_RS04320 transcriptional activator NhaR low > 92
Pseudomonas fluorescens SBW25 0.32 PFLU_RS11690 MFS transporter 0.56 PFLU_RS10530 transcriptional activator NhaR low > 109
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS11690 MFS transporter 0.56 PFLU_RS10530 transcriptional activator NhaR low > 109
Paraburkholderia graminis OAS925 0.30 ABIE53_005584 putative MFS family arabinose efflux permease 0.47 ABIE53_004867 LysR family transcriptional activator of nhaA low > 113
Escherichia coli BW25113 0.30 b3662 nepI predicted transporter (RefSeq) 0.33 b0020 nhaR DNA-binding transcriptional activator (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_00038 Purine ribonucleoside efflux pump NepI 0.33 OHPLBJKB_03641 Transcriptional activator protein NhaR low > 73
Escherichia coli ECOR38 0.30 HEPCGN_13950 nepI purine ribonucleoside efflux pump NepI 0.33 HEPCGN_09010 nhaR transcriptional activator NhaR low > 87
Escherichia coli ECOR27 0.30 NOLOHH_07370 nepI purine ribonucleoside efflux pump NepI 0.33 NOLOHH_03355 nhaR transcriptional activator NhaR low > 75
Escherichia coli ECRC62 0.30 BNILDI_04155 nepI purine ribonucleoside efflux pump NepI 0.33 BNILDI_08250 nhaR transcriptional activator NhaR low > 75
Escherichia coli ECRC101 0.30 MCAODC_05740 nepI purine ribonucleoside efflux pump NepI 0.33 MCAODC_01540 nhaR transcriptional activator NhaR low > 87
Escherichia fergusonii Becca 0.30 EFB2_00038 Purine ribonucleoside efflux pump NepI 0.34 EFB2_04023 Transcriptional activator protein NhaR low > 86
Escherichia coli ECRC98 0.30 JDDGAC_18855 nepI purine ribonucleoside efflux pump NepI 0.33 JDDGAC_14620 nhaR transcriptional activator NhaR low > 86
Escherichia coli ECRC99 0.30 KEDOAH_12915 nepI purine ribonucleoside efflux pump NepI 0.33 KEDOAH_17130 nhaR transcriptional activator NhaR — —
Escherichia coli ECRC100 0.30 OKFHMN_15230 nepI purine ribonucleoside efflux pump NepI 0.33 OKFHMN_11025 nhaR transcriptional activator NhaR low > 80
Escherichia coli Nissle 1917 0.30 ECOLIN_RS21125 purine ribonucleoside efflux pump NepI 0.34 ECOLIN_RS00110 transcriptional activator NhaR low > 55
Escherichia coli ECRC102 0.30 NIAGMN_12990 nepI purine ribonucleoside efflux pump NepI 0.33 NIAGMN_08875 nhaR transcriptional activator NhaR — —
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS13705 MFS transporter 0.47 QEN71_RS11585 transcriptional activator NhaR low > 153
Serratia liquefaciens MT49 0.29 IAI46_07000 MFS transporter 0.32 IAI46_03090 transcriptional activator NhaR low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF318 Putative transport protein 0.34 GFF1120 Transcriptional activator NhaR low > 78
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_2246 Arabinose efflux permease 0.57 Pf6N2E2_2228 Transcriptional regulator, LysR family low > 103
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_01232 Predicted arabinose efflux permease, MFS family 0.46 H281DRAFT_01823 transcriptional regulator, LysR family low > 103
Pseudomonas sp. RS175 0.29 PFR28_01200 Purine ribonucleoside efflux pump NepI 0.56 PFR28_01216 Transcriptional activator protein NhaR 0.19 84
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS28285 MFS transporter 0.46 BPHYT_RS10255 LysR family transcriptional regulator low > 109
Pseudomonas putida KT2440 0.28 PP_2647 Major facilitator family transporter 0.56 PP_2444 Transcriptional regulator, LysR family low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_3800 Major facilitator superfamily 0.58 Psyr_2422 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_3800 Major facilitator superfamily 0.58 Psyr_2422 transcriptional regulator, LysR family low > 86
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_4993 Arabinose efflux permease 0.57 Pf1N1B4_3936 Transcriptional regulator, LysR family low > 87

Not shown: 17 genomes with orthologs for HSERO_RS05365 only; 14 genomes with orthologs for HSERO_RS19615 only