Conservation of cofitness between HSERO_RS08070 and HSERO_RS18840 in Herbaspirillum seropedicae SmR1

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS08070 endonuclease IV 1.0 HSERO_RS18840 enoyl-CoA hydratase 0.36 7
Burkholderia phytofirmans PsJN 0.74 BPHYT_RS06080 endonuclease IV 0.52 BPHYT_RS14830 enoyl-CoA hydratase low > 109
Marinobacter adhaerens HP15 0.74 HP15_1285 endonuclease III 0.50 HP15_1737 enoyl-CoA hydratase/isomerase low > 73
Paraburkholderia graminis OAS925 0.74 ABIE53_001423 endonuclease-3 0.53 ABIE53_003141 enoyl-CoA hydratase/carnithine racemase low > 113
Ralstonia sp. UNC404CL21Col 0.74 ABZR87_RS09915 endonuclease III 0.63 ABZR87_RS16935 enoyl-CoA hydratase low > 80
Cupriavidus basilensis FW507-4G11 0.73 RR42_RS05970 endonuclease III 0.51 RR42_RS04550 enoyl-CoA hydratase low > 128
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_00293 DNA-(apurinic or apyrimidinic site) lyase /endonuclease III 0.53 H281DRAFT_03908 Enoyl-CoA hydratase/carnithine racemase low > 103
Escherichia coli ECOR38 0.72 HEPCGN_05910 nth endonuclease III 0.19 HEPCGN_18735 scpB methylmalonyl-CoA decarboxylase low > 87
Paraburkholderia sabiae LMG 24235 0.72 QEN71_RS24560 endonuclease III 0.53 QEN71_RS04150 enoyl-CoA hydratase low > 153
Escherichia coli BL21 0.72 ECD_01603 DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) 0.19 ECD_02750 methylmalonyl-CoA decarboxylase, biotin-independent — —
Escherichia coli ECRC99 0.71 KEDOAH_00580 nth endonuclease III 0.19 KEDOAH_08705 scpB methylmalonyl-CoA decarboxylase — —
Escherichia coli ECRC101 0.71 MCAODC_17885 nth endonuclease III 0.19 MCAODC_09955 scpB methylmalonyl-CoA decarboxylase low > 87
Escherichia coli ECRC102 0.71 NIAGMN_00540 nth endonuclease III 0.19 NIAGMN_17200 scpB methylmalonyl-CoA decarboxylase — —
Escherichia coli ECRC100 0.71 OKFHMN_27525 nth endonuclease III 0.19 OKFHMN_19435 scpB methylmalonyl-CoA decarboxylase low > 80
Dechlorosoma suillum PS 0.71 Dsui_2985 endonuclease III 0.53 Dsui_2807 enoyl-CoA hydratase/carnithine racemase low > 51
Variovorax sp. SCN45 0.68 GFF418 Endonuclease III (EC 4.2.99.18) 0.56 GFF6051 Enoyl-CoA hydratase (EC 4.2.1.17) low > 127
Variovorax sp. OAS795 0.68 ABID97_RS17315 endonuclease III 0.56 ABID97_RS07755 enoyl-CoA hydratase low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF4003 Endonuclease III (EC 4.2.99.18) 0.51 GFF5528 Enoyl-CoA hydratase (EC 4.2.1.17) low > 90
Acidovorax sp. GW101-3H11 0.66 Ac3H11_1010 Endonuclease III (EC 4.2.99.18) 0.53 Ac3H11_3192 Enoyl-CoA hydratase (EC 4.2.1.17) low > 79
Castellaniella sp019104865 MT123 0.61 ABCV34_RS08465 endonuclease III 0.55 ABCV34_RS13355 enoyl-CoA hydratase low > 48
Azospirillum brasilense Sp245 0.60 AZOBR_RS01565 endonuclease III 0.50 AZOBR_RS07775 enoyl-CoA hydratase low > 97
Azospirillum sp. SherDot2 0.59 MPMX19_02500 Endonuclease III 0.47 MPMX19_01519 Enoyl-CoA-hydratase low > 112
Magnetospirillum magneticum AMB-1 0.59 AMB_RS21105 endonuclease III 0.48 AMB_RS04340 enoyl-CoA hydratase low > 64
Bosea sp. OAE506 0.57 ABIE41_RS03410 endonuclease III 0.45 ABIE41_RS19240 enoyl-CoA hydratase low > 77
Dinoroseobacter shibae DFL-12 0.56 Dshi_3023 endonuclease III (RefSeq) 0.52 Dshi_1604 Enoyl-CoA hydratase/isomerase (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.55 PGA1_c29040 endonuclease III 0.52 PGA1_c14440 enoyl-CoA hydratase-like protein low > 62
Rhodospirillum rubrum S1H 0.53 Rru_A0153 Endonuclease III/Nth (NCBI) 0.48 Rru_A2156 Enoyl-CoA hydratase/isomerase (NCBI) low > 58
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_1263 endonuclease III 0.25 Echvi_0343 Enoyl-CoA hydratase/carnithine racemase low > 79

Not shown: 67 genomes with orthologs for HSERO_RS08070 only; 4 genomes with orthologs for HSERO_RS18840 only