Conservation of cofitness between HSERO_RS10950 and HSERO_RS17905 in Herbaspirillum seropedicae SmR1

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS10950 RNA methyltransferase 1.0 HSERO_RS17905 tRNA-dihydrouridine synthase A 0.39 1
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS06495 RNA methyltransferase 0.66 QEN71_RS22650 tRNA dihydrouridine(20/20a) synthase DusA low > 153
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS11900 RNA methyltransferase 0.67 ABZR87_RS11300 tRNA dihydrouridine(20/20a) synthase DusA low > 80
Paraburkholderia graminis OAS925 0.49 ABIE53_002488 TrmH family RNA methyltransferase 0.65 ABIE53_001975 tRNA-dihydrouridine synthase A low > 113
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS00450 RNA methyltransferase 0.68 RALBFv3_RS15730 tRNA dihydrouridine(20/20a) synthase DusA — —
Ralstonia solanacearum UW163 0.49 UW163_RS13780 RNA methyltransferase 0.68 UW163_RS13175 tRNA dihydrouridine(20/20a) synthase DusA — —
Ralstonia solanacearum PSI07 0.49 RPSI07_RS17025 RNA methyltransferase 0.68 RPSI07_RS17630 tRNA dihydrouridine(20/20a) synthase DusA low > 81
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS12065 RNA methyltransferase 0.67 BPHYT_RS08700 tRNA-dihydrouridine synthase A low > 109
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS11800 RNA methyltransferase 0.64 RR42_RS12665 tRNA-dihydrouridine synthase A low > 128
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_00625 RNA methyltransferase, TrmH family 0.65 H281DRAFT_00766 tRNA-U16,U17-dihydrouridine synthase low > 103
Ralstonia solanacearum GMI1000 0.48 RS_RS07120 RNA methyltransferase 0.68 RS_RS06510 tRNA dihydrouridine(20/20a) synthase DusA — —
Acinetobacter radioresistens SK82 0.41 MPMX26_02198 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB 0.51 MPMX26_00482 tRNA-dihydrouridine(20/20a) synthase low > 36
Castellaniella sp019104865 MT123 0.41 ABCV34_RS04035 RNA methyltransferase 0.51 ABCV34_RS04335 tRNA dihydrouridine(20/20a) synthase DusA low > 48
Variovorax sp. SCN45 0.35 GFF378 RNA (nucleoside 2'-O)-methyltransferase 0.59 GFF928 tRNA-dihydrouridine(20/20a) synthase (EC 1.3.1.91) low > 127
Acidovorax sp. GW101-3H11 0.33 Ac3H11_433 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) 0.55 Ac3H11_2288 tRNA dihydrouridine synthase A low > 79
Variovorax sp. OAS795 0.32 ABID97_RS17095 RNA methyltransferase 0.60 ABID97_RS13915 tRNA dihydrouridine(20/20a) synthase DusA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF4900 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) 0.55 GFF4791 tRNA dihydrouridine synthase A — —
Synechococcus elongatus PCC 7942 0.19 Synpcc7942_1199 probable tRNA/rRNA methyltransferase 0.51 Synpcc7942_2066 tRNA-dihydrouridine synthase A low > 38
Rhizobium sp. OAE497 0.19 ABIE40_RS01810 RNA methyltransferase 0.45 ABIE40_RS10895 tRNA dihydrouridine(20/20a) synthase DusA low > 107
Agrobacterium fabrum C58 0.18 Atu0341 rRNA methylase 0.44 Atu1515 hypothetical protein — —
Sinorhizobium meliloti 1021 0.18 SMc01130 tRNA/rRNA methyltransferase 0.38 SMc04235 tRNA-dihydrouridine synthase A — —
Azospirillum brasilense Sp245 0.15 AZOBR_RS16105 RNA methyltransferase 0.51 AZOBR_RS15935 tRNA-dihydrouridine synthase A low > 97
Caulobacter crescentus NA1000 Δfur 0.15 CCNA_01245 23S rRNA methyltransferase 0.44 CCNA_01364 NIFR3-like protein low > 67
Caulobacter crescentus NA1000 0.15 CCNA_01245 23S rRNA methyltransferase 0.44 CCNA_01364 NIFR3-like protein low > 66
Azospirillum sp. SherDot2 0.15 MPMX19_01597 23S rRNA (uridine(2479)-2'-O)-methyltransferase 0.51 MPMX19_00670 tRNA-dihydrouridine(20/20a) synthase low > 112
Brevundimonas sp. GW460-12-10-14-LB2 0.15 A4249_RS05435 RNA methyltransferase 0.45 A4249_RS10515 tRNA dihydrouridine(20/20a) synthase DusA — —

Not shown: 4 genomes with orthologs for HSERO_RS10950 only; 58 genomes with orthologs for HSERO_RS17905 only