Conservation of cofitness between HSERO_RS10860 and HSERO_RS16785 in Herbaspirillum seropedicae SmR1

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS10860 RNA pseudouridylate synthase 1.0 HSERO_RS16785 aldo/keto reductase 0.29 17
Variovorax sp. OAS795 0.65 ABID97_RS00980 pseudouridine synthase 0.43 ABID97_RS21725 aldo/keto reductase low > 91
Variovorax sp. SCN45 0.64 GFF3530 Pseudouridine synthase 0.41 GFF3107 Oxidoreductase, aldo/keto reductase family low > 127
Castellaniella sp019104865 MT123 0.63 ABCV34_RS03070 pseudouridine synthase 0.42 ABCV34_RS02780 aldo/keto reductase low > 48
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS07850 pseudouridine synthase 0.60 A4249_RS07260 aldo/keto reductase low > 48
Lysobacter sp. OAE881 0.39 ABIE51_RS13020 rRNA pseudouridine synthase 0.55 ABIE51_RS11290 aldo/keto reductase low > 62
Rhodanobacter denitrificans MT42 0.38 LRK55_RS15640 rRNA pseudouridine synthase 0.66 LRK55_RS10155 aldo/keto reductase low > 63
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS15885 rRNA pseudouridine synthase 0.66 LRK54_RS10515 aldo/keto reductase low > 59
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_04535 rsuA RNA-binding protein 0.65 OKGIIK_13390 aldo/keto reductase low > 52
Pseudomonas sp. RS175 0.36 PFR28_00484 Dual-specificity RNA pseudouridine synthase RluF 0.59 PFR28_02364 Aldo-keto reductase YhdN low > 88
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_4655 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.60 PfGW456L13_2966 Aldo-keto reductase low > 87
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_05610 RNA-binding protein 0.62 AO356_23370 aldo/keto reductase low > 104
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.1469.1 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.62 Xcc-8004.4648.1 Oxidoreductase low > 74
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_3158 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.66 Pf1N1B4_4693 Oxidoreductase low > 87
Pseudomonas simiae WCS417 0.35 PS417_05870 RNA-binding protein S4 0.65 PS417_14445 aldo/keto reductase low > 88
Caulobacter crescentus NA1000 0.35 CCNA_00898 ribosomal large subunit pseudouridine synthase F 0.48 CCNA_03097 aldo/keto reductase family protein low > 66
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_00898 ribosomal large subunit pseudouridine synthase F 0.48 CCNA_03097 aldo/keto reductase family protein low > 67
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS05940 RNA-binding protein S4 0.65 PFLU_RS16375 aldo/keto reductase low > 109
Pseudomonas fluorescens SBW25 0.35 PFLU_RS05940 RNA-binding protein S4 0.65 PFLU_RS16375 aldo/keto reductase low > 109
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_1390 RNA-binding S4 0.64 Psyr_2519 Aldo/keto reductase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_1390 RNA-binding S4 0.64 Psyr_2519 Aldo/keto reductase low > 86
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_16865 RNA-binding protein 0.67 AO353_23805 aldo/keto reductase low > 101
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS18320 rRNA pseudouridine synthase 0.66 ABZR86_RS16200 aldo/keto reductase 0.38 48
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_2980 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.62 Pf6N2E2_1615 Aldo-keto reductase low > 103
Alteromonas macleodii MIT1002 0.25 MIT1002_01776 Ribosomal large subunit pseudouridine synthase F 0.16 MIT1002_03752 Oxidoreductase YdhF low > 70
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_1010 pseudouridine synthase 0.44 Echvi_4177 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) low > 79

Not shown: 6 genomes with orthologs for HSERO_RS10860 only; 36 genomes with orthologs for HSERO_RS16785 only