Conservation of cofitness between HSERO_RS01565 and HSERO_RS16660 in Herbaspirillum seropedicae SmR1

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS01565 hemolysin secretion protein D 1.0 HSERO_RS16660 NAD-dependent dehydratase 0.29 9
Dechlorosoma suillum PS 0.59 Dsui_2025 RND family efflux transporter, MFP subunit 0.47 Dsui_0608 nucleoside-diphosphate-sugar epimerase low > 51
Paraburkholderia graminis OAS925 0.58 ABIE53_004107 multidrug efflux system membrane fusion protein 0.54 ABIE53_003278 nucleoside-diphosphate-sugar epimerase low > 113
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS22510 MexE family multidrug efflux RND transporter periplasmic adaptor subunit 0.52 BPHYT_RS15570 NAD-dependent dehydratase 0.17 59
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_03189 membrane fusion protein, multidrug efflux system 0.51 H281DRAFT_04055 Nucleoside-diphosphate-sugar epimerase low > 103
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS19405 efflux RND transporter periplasmic adaptor subunit 0.48 ABZR87_RS00275 NAD-dependent epimerase/dehydratase family protein low > 80
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS20100 efflux RND transporter periplasmic adaptor subunit 0.51 QEN71_RS03140 SDR family NAD(P)-dependent oxidoreductase low > 153
Ralstonia solanacearum PSI07 0.54 RPSI07_RS05170 efflux RND transporter periplasmic adaptor subunit 0.45 RPSI07_RS12730 NAD-dependent dehydratase low > 81
Azospirillum sp. SherDot2 0.52 MPMX19_02967 Efflux pump periplasmic linker BepF 0.17 MPMX19_02719 Protein YeeZ low > 112
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS27680 MexE family multidrug efflux RND transporter periplasmic adaptor subunit 0.43 RR42_RS16945 NAD-dependent dehydratase low > 128
Variovorax sp. SCN45 0.46 GFF430 RND efflux system, membrane fusion protein 0.44 GFF6027 Nucleoside-diphosphate-sugar epimerases low > 127
Variovorax sp. OAS795 0.45 ABID97_RS17355 efflux RND transporter periplasmic adaptor subunit 0.43 ABID97_RS07870 SDR family oxidoreductase low > 91
Acidovorax sp. GW101-3H11 0.44 Ac3H11_259 Probable Co/Zn/Cd efflux system membrane fusion protein 0.42 Ac3H11_3785 Nucleoside-diphosphate-sugar epimerases low > 79
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_2967 Secretion protein HlyD 0.11 Psyr_0206 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_2967 Secretion protein HlyD 0.11 Psyr_0206 conserved hypothetical protein low > 86
Rhizobium sp. OAE497 0.41 ABIE40_RS14880 efflux RND transporter periplasmic adaptor subunit 0.15 ABIE40_RS01305 SDR family oxidoreductase low > 107
Agrobacterium fabrum C58 0.40 Atu2482 HlyD family secretion protein 0.16 Atu0291 hypothetical protein low > 89
Pseudomonas fluorescens SBW25 0.40 PFLU_RS14265 efflux RND transporter periplasmic adaptor subunit 0.10 PFLU_RS25435 NAD-dependent epimerase/dehydratase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS14265 efflux RND transporter periplasmic adaptor subunit 0.10 PFLU_RS25435 NAD-dependent epimerase/dehydratase family protein low > 109
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS15405 efflux RND transporter periplasmic adaptor subunit 0.10 ABZR86_RS10470 NAD-dependent epimerase/dehydratase family protein low > 74
Sinorhizobium meliloti 1021 0.37 SMc01094 multidrug efflux system transmembrane protein 0.16 SMc00405 hypothetical protein low > 103
Rhodospirillum rubrum S1H 0.36 Rru_A0887 Secretion protein HlyD (NCBI) 0.17 Rru_A3378 hypothetical protein (NCBI) low > 58
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_14950 Efflux RND transporter periplasmic adaptor subunit 0.12 OKGIIK_11175 NAD(P)-dependent oxidoreductase low > 52
Azospirillum brasilense Sp245 0.31 AZOBR_RS16480 hemolysin secretion protein D 0.16 AZOBR_RS17660 epimerase low > 97
Bosea sp. OAE506 0.28 ABIE41_RS17115 efflux RND transporter periplasmic adaptor subunit 0.17 ABIE41_RS03140 SDR family oxidoreductase low > 77

Not shown: 33 genomes with orthologs for HSERO_RS01565 only; 8 genomes with orthologs for HSERO_RS16660 only