Conservation of cofitness between HSERO_RS21280 and HSERO_RS15305 in Herbaspirillum seropedicae SmR1

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS21280 allantoinase 1.0 HSERO_RS15305 sulfite oxidase 0.30 4
Ralstonia sp. UNC404CL21Col 0.85 ABZR87_RS15095 allantoinase PuuE 0.52 ABZR87_RS02645 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 80
Ralstonia solanacearum UW163 0.84 UW163_RS10480 allantoinase PuuE 0.51 UW163_RS06620 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Ralstonia solanacearum PSI07 0.84 RPSI07_RS14065 allantoinase PuuE 0.51 RPSI07_RS10245 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 81
Ralstonia solanacearum IBSBF1503 0.84 RALBFv3_RS03245 allantoinase PuuE 0.51 RALBFv3_RS06995 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 76
Ralstonia solanacearum GMI1000 0.83 RS_RS10635 allantoinase PuuE 0.51 RS_RS14935 sulfoxide reductase heme-binding subunit YedZ low > 80
Cupriavidus basilensis FW507-4G11 0.82 RR42_RS05255 allantoinase 0.50 RR42_RS19055 sulfite oxidase low > 128
Serratia liquefaciens MT49 0.76 IAI46_04175 allantoinase PuuE 0.22 IAI46_22740 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 86
Castellaniella sp019104865 MT123 0.75 ABCV34_RS06095 allantoinase PuuE 0.30 ABCV34_RS15015 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 48
Dickeya dadantii 3937 0.75 DDA3937_RS16690 allantoinase PuuE 0.24 DDA3937_RS01410 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 74
Dickeya dianthicola ME23 0.74 DZA65_RS17850 allantoinase PuuE 0.24 DZA65_RS01390 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 75
Pectobacterium carotovorum WPP14 0.74 HER17_RS17765 allantoinase PuuE 0.20 HER17_RS20190 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 75
Dickeya dianthicola 67-19 0.74 HGI48_RS16775 allantoinase PuuE 0.23 HGI48_RS01330 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 71
Pantoea sp. MT58 0.73 IAI47_15300 allantoinase PuuE 0.20 IAI47_02420 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 76
Variovorax sp. SCN45 0.73 GFF1815 Uricase (urate oxidase) (EC 1.7.3.3) 0.44 GFF5314 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 127
Acidovorax sp. GW101-3H11 0.73 Ac3H11_1095 Uricase (urate oxidase) (EC 1.7.3.3) 0.38 Ac3H11_2977 FIG001196: Membrane protein YedZ low > 79
Variovorax sp. OAS795 0.72 ABID97_RS22210 allantoinase PuuE 0.44 ABID97_RS23310 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 91
Enterobacter asburiae PDN3 0.72 EX28DRAFT_1944 putative urate catabolism protein 0.21 EX28DRAFT_3305 Predicted membrane protein low > 76
Rahnella sp. WP5 0.72 EX31_RS21150 allantoinase PuuE 0.23 EX31_RS12220 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 89
Klebsiella michiganensis M5al 0.71 BWI76_RS10540 allantoinase 0.22 BWI76_RS25520 sulfoxide reductase heme-binding subunit YedZ low > 92
Enterobacter sp. TBS_079 0.71 MPMX20_01662 hypothetical protein 0.21 MPMX20_04161 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 85
Hydrogenophaga sp. GW460-11-11-14-LB1 0.68 GFF3309 Uricase (urate oxidase) (EC 1.7.3.3) 0.39 GFF1347 FIG001196: Membrane protein YedZ low > 90
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS21385 allantoinase PuuE 0.18 PFLU_RS25625 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 109
Pseudomonas fluorescens SBW25 0.64 PFLU_RS21385 allantoinase PuuE 0.18 PFLU_RS25625 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 109
Pseudomonas stutzeri RCH2 0.64 Psest_1200 putative urate catabolism protein 0.20 Psest_1041 Predicted membrane protein low > 67
Pseudomonas simiae WCS417 0.64 PS417_19415 allantoinase 0.20 PS417_23785 sulfite oxidase low > 88
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_02320 allantoinase 0.18 AO353_14520 sulfite oxidase low > 101
Agrobacterium fabrum C58 0.56 Atu2328 hypothetical protein 0.32 Atu1920 hypothetical protein low > 89
Rhizobium sp. OAE497 0.56 ABIE40_RS13840 allantoinase PuuE 0.29 ABIE40_RS07995 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ 0.57 101

Not shown: 17 genomes with orthologs for HSERO_RS21280 only; 25 genomes with orthologs for HSERO_RS15305 only