Conservation of cofitness between HSERO_RS06265 and HSERO_RS11490 in Herbaspirillum seropedicae SmR1

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS06265 3-hydroxybutyrate dehydrogenase 1.0 HSERO_RS11490 D-ribose ABC transporter, permease component RbsC (from data) 0.22 18
Variovorax sp. OAS795 0.73 ABID97_RS14375 3-hydroxybutyrate dehydrogenase 0.53 ABID97_RS24765 ABC transporter permease low > 91
Variovorax sp. SCN45 0.73 GFF1032 Oxidoreductase, short-chain dehydrogenase/reductase family 0.55 GFF2138 Ribose ABC transporter, permease protein RbsC (TC 3.A.1.2.1) low > 127
Paraburkholderia graminis OAS925 0.67 ABIE53_004793 3-hydroxybutyrate dehydrogenase 0.67 ABIE53_002323 ribose transport system permease protein low > 113
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS09070 3-hydroxybutyrate dehydrogenase 0.66 QEN71_RS07350 ABC transporter permease low > 153
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS19645 3-hydroxybutyrate dehydrogenase 0.62 ABZR87_RS09960 ABC transporter permease low > 80
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS11930 3-hydroxybutyrate dehydrogenase 0.66 BPHYT_RS11210 ABC transporter permease low > 109
Ralstonia solanacearum GMI1000 0.63 RS_RS22245 3-hydroxybutyrate dehydrogenase 0.56 RS_RS05025 ABC transporter permease low > 80
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_04976 3-hydroxybutyrate dehydrogenase 0.67 H281DRAFT_05227 monosaccharide ABC transporter membrane protein, CUT2 family low > 103
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS18705 3-hydroxybutyrate dehydrogenase 0.59 RALBFv3_RS14245 ABC transporter permease low > 76
Ralstonia solanacearum UW163 0.63 UW163_RS20425 3-hydroxybutyrate dehydrogenase 0.59 UW163_RS11710 ABC transporter permease
Ralstonia solanacearum PSI07 0.62 RPSI07_RS04890 3-hydroxybutyrate dehydrogenase 0.56 RPSI07_RS19220 ABC transporter permease low > 81
Phaeobacter inhibens DSM 17395 0.35 PGA1_c15020 D-beta-hydroxybutyrate dehydrogenase BdhA 0.20 PGA1_c23070 putative ribose transport system permease protein low > 62
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_21770 3-hydroxybutyrate dehydrogenase 0.63 AO353_20825 ABC transporter permease low > 101
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_5633 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) 0.62 Pf1N1B4_6033 D-ribose ABC transporter, permease component RbsC (from data)
Pseudomonas simiae WCS417 0.29 PS417_12150 3-hydroxybutyrate dehydrogenase 0.63 PS417_18395 D-ribose ABC transporter, permease component RbsC (from data)
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_2873 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) 0.66 PfGW456L13_3910 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) low > 87
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_00420 3-hydroxybutyrate dehydrogenase 0.66 AO356_00960 ABC transporter permease low > 104
Pseudomonas sp. RS175 0.28 PFR28_01395 D-beta-hydroxybutyrate dehydrogenase 0.66 PFR28_02735 Ribose import permease protein RbsC low > 88
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_2041 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) 0.66 Pf6N2E2_163 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) low > 103
Pseudomonas fluorescens SBW25 0.28 PFLU_RS12840 3-hydroxybutyrate dehydrogenase 0.63 PFLU_RS20370 ABC transporter permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS12840 3-hydroxybutyrate dehydrogenase 0.63 PFLU_RS20370 ABC transporter permease low > 109
Pseudomonas putida KT2440 0.28 PP_3073 3-hydroxybutyrate dehydrogenase 0.66 PP_2456 D-ribose ABC transporter - permease subunit low > 96
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_4813 Short-chain dehydrogenase/reductase SDR 0.62 Psyr_2153 monosaccharide ABC transporter membrane protein, CUT2 family
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_4813 Short-chain dehydrogenase/reductase SDR 0.62 Psyr_2153 monosaccharide ABC transporter membrane protein, CUT2 family low > 86

Not shown: 41 genomes with orthologs for HSERO_RS06265 only; 0 genomes with orthologs for HSERO_RS11490 only